Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0469 |
Symbol | |
ID | 3624211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 564692 |
End bp | 565621 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637699362 |
Product | nickel ABC transporter, permease protein |
Protein accession | YP_304031 |
Protein GI | 73668016 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAAG GCATAGGAGA ACGGTTATTC ACATTGATTC CAGTACTGCT GGCTATTTCA TTAATAACCT TCATCCTCGG CAGCATGTCA TCAGGTGACA CGGCACGTAC ACTAGCTGAA AAGAAATATG ACAGGCCAAC ATATGAGCAG ATTGAGGAAA TACGAACCGA AATGGGATTT GACAGACCGG TGCTCGTCCA ATACGCCAGT TGGCTTAAAG ATGCGGTGAA GGGTAATTTG GGCTTTTCTT ATTCAAATGA CAGGCCGGTG GTTGATGAGA TCGTTCAATA TTTTCCTAAA ACATTACAGT TGGCCCTTCT AGCACTATTG TTTTTAATTA TAATTTCATT TACTCTTGGA ATTTTATCGG CAGTGTTTTC CGGCTCGTGG ATCGACAAGA TTTCCAGAAT ATACTGTTTT TGGAGTGTAT CAATGCCTGA ATTCTGGTTT GGACTCATTC TACTGTATAT TTTCGGTGCT CGTCTTGGAC TAATATCAGT GCTTGGTGGA AGTTCAATGA AATTTCCAAT AATACCTGCT CTTACAATGT CTATATGCAG CGGTGGGATT TATGTCCGAC TTATTCGCAC AAATATGGAG GAAGTACTGA ACAAAGGATA TATCCGTGCA GCCAGAGCAA AAGGCGTCAG CGAATATAAA ATAATAACAA AACATGCTCT AAAAAACGCA ACGCTTCCTG TACTTAACAA GCTTGGGATC GGATTTGGAT CTTTGTTAGC TGGATCTGCA ATTATTGAAT CAATATTTTC ATGGAATGGG CTTGGAAATC TGGCTCTCGA ATCTGTTAAA CTCAAAGACT ATCCAGTAGT CCAGGGATAT GTGCTGTTTA TGGCTGTTTT GATGGTGTTA ATTAACCTGG CTGTAGATAT TGTCTGCAGC ATCATTGATC CGCGTCTTAG AAATGAATGA
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Protein sequence | MLKGIGERLF TLIPVLLAIS LITFILGSMS SGDTARTLAE KKYDRPTYEQ IEEIRTEMGF DRPVLVQYAS WLKDAVKGNL GFSYSNDRPV VDEIVQYFPK TLQLALLALL FLIIISFTLG ILSAVFSGSW IDKISRIYCF WSVSMPEFWF GLILLYIFGA RLGLISVLGG SSMKFPIIPA LTMSICSGGI YVRLIRTNME EVLNKGYIRA ARAKGVSEYK IITKHALKNA TLPVLNKLGI GFGSLLAGSA IIESIFSWNG LGNLALESVK LKDYPVVQGY VLFMAVLMVL INLAVDIVCS IIDPRLRNE
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