Gene Mbar_A0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0461 
Symbol 
ID3624337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp556202 
End bp556636 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content48% 
IMG OID637699354 
Productprefoldin subunit alpha 
Protein accessionYP_304023 
Protein GI73668008 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1730] Predicted prefoldin, molecular chaperone implicated in de novo protein folding 
TIGRFAM ID[TIGR00293] prefoldin, archaeal alpha subunit/eukaryotic subunit 5 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.735379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAAG TCAGTGAAGA AGATATCAGA AATCTGGCAG CCAGGCATCA GGAGTTCCAG 
AGGCAGGCCG AAGGCTTAAA GCAGCAGATG AACATGGTCC AGGCTTCGAT TACAAGCTGC
GACCAGGCAA CTGTAACCAT CAACGAGCTT AAAACCGTTT CAGCGGAAGG CAAGACTGCC
GAAACGATGG TACCAGTTGG ATTTGGCTCA TTCGTTTACG CCGAAATAAA AAATGCAGAT
AAGGTTATTG TGGACCTTGG AGCAGGCTTT AGTGCGGAAG AGACCGCTGA TGAAGCCGTT
GAAACCCTGA AGCGCCGCAA AGAACAGCTT ACGAAAATTC TCGAACAGAT GAGTGCTTCA
CTGACTAAAT ATATACAGGG TATGCAGGCC CTGGAAGTTG AAGCTGAAAA GCTTCAACAA
CCCAGCCAGG CCTAA
 
Protein sequence
MVEVSEEDIR NLAARHQEFQ RQAEGLKQQM NMVQASITSC DQATVTINEL KTVSAEGKTA 
ETMVPVGFGS FVYAEIKNAD KVIVDLGAGF SAEETADEAV ETLKRRKEQL TKILEQMSAS
LTKYIQGMQA LEVEAEKLQQ PSQA