Gene Mbar_A0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0454 
Symbol 
ID3624330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp552991 
End bp553440 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID637699347 
Product30S ribosomal protein S19e 
Protein accessionYP_304016 
Protein GI73668001 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.393602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG TGTTTGATGT CCCTGCAATG GAACTCATCG AGAAGGTTGC AGGCATACTT 
AAAGAAAATG AAAACGTCGT TCCCCCTGAG TGGGCAAAGA ACGTAAAGAC CGGGGTTCAC
AAGGAACTCC CTCCGAACAA CGATGACTGG TGGTATATCA GAACCGCAGC GATCCTGAGA
AAAATCTATA CAGACGGGCC TGTAGGAATT GAAAGGCTCA GATCAATATA CGGTGGAAAG
AAGGACAACG GATCACAGCC ATACCACAAA GCAAAAGGCA GCGGTTCGAT TGCCAGGAAG
GCAGTACAGC AGCTTGAAGC TGCAGGTTAC CTGCAAAAAG TAAAGGACGG AAGAACGGTA
TCTGCAAAAG GACGTTCTAT GCTTGATAAT GCAGCCAATG AGCTCAAGCA GGAACTTCTT
GAGAAGATCC CTGAACTTGC AAAATACTGA
 
Protein sequence
MTTVFDVPAM ELIEKVAGIL KENENVVPPE WAKNVKTGVH KELPPNNDDW WYIRTAAILR 
KIYTDGPVGI ERLRSIYGGK KDNGSQPYHK AKGSGSIARK AVQQLEAAGY LQKVKDGRTV
SAKGRSMLDN AANELKQELL EKIPELAKY