Gene Mbar_A0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0403 
Symbol 
ID3627039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp477744 
End bp479018 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content44% 
IMG OID637699297 
Productadenylosuccinate synthetase 
Protein accessionYP_303966 
Protein GI73667951 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.841501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACGA TAATCACAGG CGCGCAGTTC GGCGACGAGG GAAAAGGCAA AATTGTTGAC 
CTTCTTGCAA AAGATTACGA CATTGTTGCC CGTTTCCAAG GAGGAAACAA CGCAGGCCAT
ACAGTCAGAG TAGGAAATGA GGTTTACAAA TTACACCTGA TTCCTTCGGG TATTTTACTT
AATGCTAGAG TTCTAATAGG GCCTGGGGTT GTCCTGAATC CTGAGGTTCT TGCCAAAGAA
ATCGCAATGT TTGAAAAGCA TGGCATACAG GTAAATGCCG AAAAACTCGG AGTCGATGCG
AAGACAAGCA TAATCATGCC TTACCACATC GAAATGGATG GACTAAGGGA AGAATCAAGG
GAAAAGAAAA TTGGGACTAC AAAACGCGGA ATAGGTTACG CGTATATCGA TAAAGTAGCA
AGAGACGAAT TCCGCATGGC TGAGCTTGTA GACCAGGAAC GTTTTCTTGC AAGACTTGAG
GAACTTGCTC CCCAGAAAGA AAAGGAAATA GCAACACTGG GAGGAGATCC TAAAATCGTT
AGAGACCCTG CACTAATTGA ACGATATCTT GAGCTGGGAA AGCAGTTTGC CACTTATATA
ACAGATGTCT CCAGAGAAAT CAATAAAGCT CTTGATGAAG GAAAACACGT GATGGCTGAA
GCTGCTCAGG GTACACATCT CGATGTTATA CACGGAACGC AGAAATTCGT AACTTCTTCT
TCTACAATTG CAGGCTCTGC CTGTGCCAAC CTCGGAGTTG GCCCTACAAG AGTAAATAAT
GTAATTGCTA TAGTAAAAGC TTATATCACA AGAGTCGGTG AAGGCCCACT TCCAACGGAA
CTAACAGGAG AACTCGGGGA AAGACTACAA AAAGCCGGAG GAGAATTTGG GACTACTACT
GGGAGAGGCA GAAGATGTGG ATGGTTTGAT TTACCTCTAC TGAAGAAAGC TATTGCTCTT
AATGGATATA CCGAAATTTC CCTGACCAAA CTGGATGTAC TCACAGGCCT TAATCCAATC
AGGATCTGTA CCGGCTATAC CTTCAAGGGG GAAAATCTTG ATTATCCTCC AGAACTTACT
GCTGATCTTG CCGAGTGCAT GCCTGTTTAC GAAGACCTTC CTGGCTGGGA AACTGACCTT
ACTGAAGTAA AAGCCTTCGA GGAACTTCCG GAAAACGCAA GAAACTATGT AAAAAGATTG
GAAGAACTGA TGGAAGTACC GATTAATTAC ATTTCAGTAG GTCCGGGCAG GGCGCAAACC
TTTAAAAAAG AGTGA
 
Protein sequence
MFTIITGAQF GDEGKGKIVD LLAKDYDIVA RFQGGNNAGH TVRVGNEVYK LHLIPSGILL 
NARVLIGPGV VLNPEVLAKE IAMFEKHGIQ VNAEKLGVDA KTSIIMPYHI EMDGLREESR
EKKIGTTKRG IGYAYIDKVA RDEFRMAELV DQERFLARLE ELAPQKEKEI ATLGGDPKIV
RDPALIERYL ELGKQFATYI TDVSREINKA LDEGKHVMAE AAQGTHLDVI HGTQKFVTSS
STIAGSACAN LGVGPTRVNN VIAIVKAYIT RVGEGPLPTE LTGELGERLQ KAGGEFGTTT
GRGRRCGWFD LPLLKKAIAL NGYTEISLTK LDVLTGLNPI RICTGYTFKG ENLDYPPELT
ADLAECMPVY EDLPGWETDL TEVKAFEELP ENARNYVKRL EELMEVPINY ISVGPGRAQT
FKKE