Gene Mbar_A0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0393 
Symbol 
ID3627219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp462503 
End bp463684 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content44% 
IMG OID637699284 
Productmetallo cofactor biosynthesis protein 
Protein accessionYP_303956 
Protein GI73667941 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTAT ATGATAGTCC GGTACTTAAG GTAAATGCCA GTACAGAAAA CGAAAAAATT 
GTGCTTGATA CAGAAGGTCC TCTTTCCCAG CTTGCAAAAC CTTTCCTCAA ACGCGTAAAC
AACATTTTTG CGGAAGAAAA ACCCATTTCA GTGGATGAAA ACGAGATAAT TTTCTCTACA
TGGATCCCAC CTATTCCGGG GCCTGTTTTC AGTCGGGTGA TAGGTGCTGA GATCGCAGCT
ATCCGGAAAA AAAGGGTCCC TGATCAGTTT TCAATAGGAA TTACGGCTCG TTGTCCTAAC
CGCTGTATCC ACTGTGGAGC AGCTGGTATC AAGCCAGAAA AAGAACTTAC CCTGGATGAA
ATTTCCGGAG CTATAGACCA GAGCCTGGAT CTTGGGTCTT ATCTTATTTC TTTCGATGGC
GGGGAGACCA TGCTTCGGGA TGATCTTGTA GAGATGGTAG CTAGAGTAGA TAAATCCAGG
GCAATTGCTA CCTGTCTCAC CTCAGGTTTC AAGCTTTCCG AAGAAAGGGC AAAGGAGCTT
AAAGCCGCAG GGTTATATGC CTCAAGAATT AGTCTGGACA GCCCAGTTGA AGCCGAACAT
GACCGCATTA GGGGCCGAGA AGGTGCATAT AGAGATTCAA TTGCCGGAAT CAAAAATTCA
ATAGCTGCCG GGATCCTTAC TGATATGTTT GTGGTTGTTT CCCCTCACAA TATCGATGAC
CTTGAAGAAT TTTACAACCT TGCATTTAAC CTTGGAATGC ATGAGCTTTC TATCTATGAA
ATTATTGCCG TCGGGCGCTG GCTTGAACAT GAGGATGAAG TAATAGGGGA AAAAGATGTC
TCAAGGCTTG AGAAATTCCA GAAAAAAATG AACTCTAAAC CTGAAGGTCC CAGAGTCACC
GCGTTCCCGT ATTTTTTGGG GCCGAGTCTT TTTGGGTGTT TTGCAGGAAG ACGATGGATG
CATGTCGCTT CGGATGGGGA AGTAATGCCG TGTGCCTACA CTCCTCTATC TTTTGGAAAT
ATCTGTGAAG AACCTCTGGA AGCTATCTGG AAGCGTATGG GTAAGCACAA AGCTTACAAA
AAAGATAATG CCGTATATTG CATGATGCGC AACCCCGATT TCCGGAAGGA ATATATTCAT
ACAATACCTC AGGGCGCAAA GATTCCTTAC AGAGTTAAAT AA
 
Protein sequence
MRVYDSPVLK VNASTENEKI VLDTEGPLSQ LAKPFLKRVN NIFAEEKPIS VDENEIIFST 
WIPPIPGPVF SRVIGAEIAA IRKKRVPDQF SIGITARCPN RCIHCGAAGI KPEKELTLDE
ISGAIDQSLD LGSYLISFDG GETMLRDDLV EMVARVDKSR AIATCLTSGF KLSEERAKEL
KAAGLYASRI SLDSPVEAEH DRIRGREGAY RDSIAGIKNS IAAGILTDMF VVVSPHNIDD
LEEFYNLAFN LGMHELSIYE IIAVGRWLEH EDEVIGEKDV SRLEKFQKKM NSKPEGPRVT
AFPYFLGPSL FGCFAGRRWM HVASDGEVMP CAYTPLSFGN ICEEPLEAIW KRMGKHKAYK
KDNAVYCMMR NPDFRKEYIH TIPQGAKIPY RVK