Gene Mbar_A0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0382 
Symbol 
ID3627208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp450601 
End bp452904 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content46% 
IMG OID637699273 
Producthydrogenase maturation protein 
Protein accessionYP_303945 
Protein GI73667930 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0068] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00143] [NiFe] hydrogenase maturation protein HypF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACG AAGCAAGGCT TCTTCATATT ACCGGTACTG TTCAGGGGGT AGGTTTTCGC 
CCTTTTATAT CTCAGCTTGC AAAAGTCCAT GGGCTTTTCG GATACGTGAA AAATCTTGGA
AACTACGTGG AAATCCTTGT AGAGGGAAAT AAGGAAAGCC TTGATAATTT CATTAAAGAA
ATCCCTGAAA AGAAACCTCC TCTGGCTAAA GTTAAAGAAA TCAAAACAAA AAATACCCCC
TTTTTTGGGT ATTCGAAGTT TATTATCGTG CCCAGCGAAT CCGGAGTTTT TGAAAATTCC
ATAATTCCTC CTGATACGGC TATTTGCGAA CAGTGCAGGT CTGAGATTTT TGATCCTTCT
TCCAGGTATT TTCATTATCC TTTTACGGTC TGCACAAATT GCGGGCCCAG ATATACAACC
GTCCGAACCC TTCCTTATGA CCGGGAAAAT ACCACTATGG CAGATTTTCC TCTTTGCCCG
GAATGTGAAA CCGAATATAC CGATCCTCTC AACCGAAGAT ATCATGCCCA GCCTGTCTGC
TGCCCAAAGT GCGGGCCAGA AATCTGGCTC TCGGACTCCG AAGGAAATGT CCTGGTAAAA
GGTTATGAAG CAATTATACA TGCTTCTGAT CTCCTTCAAC AGGGCTCAAT TCTTGCTATA
AAAGGATTTG GGGGTTTTCA TATAGCCTGC GATGCGCGAA AGGAGATGCC TGTAAATGAG
CTTCGAAGAC GGTTAAGGCG TCCAGAACAA CCTTTTGCAG TCATGGCAAA AAATGCCGAA
GTTGCGGAAA CCTTTGCAGA ACTTGAAGGT GTGGGAAGGG AATATTTAAC TTCTTACCGC
CGGCCTATTA CCGTGCTTCC CAGCTCAAGG GAATCCGGCC TGGCAGAATC GGTTACTTCT
GGCCTTCACA ATATAGGGGT TATGCTTCCC TATACAGGTA CACAGAATCT ACTTTTTGAT
CGCGTACCTG ATGCGGTATA TGTTATGACC TCGGCAAATC TTCCAGGAAG GCCCATGGTT
GTTGAGAATA AAGAGGCGCT TGAGAAACTT AAAGGGATTG TCGATTATTA CCTGCTGCAC
AACAGGGTTA TTGCAAACCG GAACGATGAT ACGGTTATAA GGGTTGTGAA TGGAAAGGCT
GCCTTTATTC GTCGTTCCCG CGGTTTTGTA CCTGAACCCG TAGAGCTGCC TTTCGAAGTT
AAAGCTTCTA TAGGCGTTGG GGCTGAAATG AATTCTACGG TTACTGTGGC AAAAGGAAAG
CTTGCCTATG TTTCTCAGTA TATAGGAAAT ACCAGTCATG TAGAAACCTT CAGATACCAT
TCCGAGGTTG TCAGGCATCT AATCCAACTT ACCGGAATCG AGCCCCTCTA CTGGGGTTGT
GACTTGCACC CTGCATTTAA CACAACACGT TTTGCGCTAA AGATGGGAGG GGAGGATACT
CTTCAGGTTC AACATCATCA AGCTCACATG TTAGCGCTTA TGGCTGATAA CTCTCTCCCA
CTGGATTCCC GAATTCTCGG AATTGCCCTT GATGGAGTGG GATATGGCAC TGACGGTACA
GTCTGGGGAG GGGAACTCTT TGAATCTTCT TACTTTGGAT ACGAACGTAT TGGGCACTTA
TTCCCTCAGC CGATGCCAGG TGGCGACCTT GCCTCGCGGA TACCTTCAAG AATGGTTTTG
GGAATTCTTT TTGAGAAACT TGGGAGAGCA GAATTGGAAA AACTTCCCCT TTCTTTTCCG
AAAGGAGCTA TGGAGTTTTC AACTGTGATG AAACAGCTTG AAACCGGGGT AAATGTTATC
CGAAGCAGCA GTACAGGACG GGTACTGGAT GCTGCGGCTG CCCTGCTTGG AATCTGCGAG
ATTAGAACTT ATGAAGGAGA GCCGGCAATG AAACTCGAAT CTGCCGCAAC GAAGAGTACC
CATTCAGTAG ATCTTCCTAT CATTTTCACG AATGATAACG ACTCCGGAGT TCCTCTACTT
GACACCACTG AGCTTCTCCT GGGGGCATAT GAGCTTTCCG GAAAGTATCC CCCTGTTGAT
CTTGCTTTTG CGGTTGAGGA AAGCTTTGCA ACGGGAATTT CAGAACTTGC CATTTCTCTT
GCCGCAAAAA GGGGGCTTGA AAAGATAGGC CTTAGCGGAG GAGTTGCTTA TAACAATCAC
ATCACTTCGT GCATTGCAAG AACTGTTACA GAAGCGGGTT TTGAATTCCT GGTTCATCGC
CAGGTTCCCT GTGGAGACGG ATGTATTTCA TTTGGGCAAG CTCTTGCGGC AGGGTTGAGC
ACAAAACCTG AGAATAAGTT TTAA
 
Protein sequence
MQNEARLLHI TGTVQGVGFR PFISQLAKVH GLFGYVKNLG NYVEILVEGN KESLDNFIKE 
IPEKKPPLAK VKEIKTKNTP FFGYSKFIIV PSESGVFENS IIPPDTAICE QCRSEIFDPS
SRYFHYPFTV CTNCGPRYTT VRTLPYDREN TTMADFPLCP ECETEYTDPL NRRYHAQPVC
CPKCGPEIWL SDSEGNVLVK GYEAIIHASD LLQQGSILAI KGFGGFHIAC DARKEMPVNE
LRRRLRRPEQ PFAVMAKNAE VAETFAELEG VGREYLTSYR RPITVLPSSR ESGLAESVTS
GLHNIGVMLP YTGTQNLLFD RVPDAVYVMT SANLPGRPMV VENKEALEKL KGIVDYYLLH
NRVIANRNDD TVIRVVNGKA AFIRRSRGFV PEPVELPFEV KASIGVGAEM NSTVTVAKGK
LAYVSQYIGN TSHVETFRYH SEVVRHLIQL TGIEPLYWGC DLHPAFNTTR FALKMGGEDT
LQVQHHQAHM LALMADNSLP LDSRILGIAL DGVGYGTDGT VWGGELFESS YFGYERIGHL
FPQPMPGGDL ASRIPSRMVL GILFEKLGRA ELEKLPLSFP KGAMEFSTVM KQLETGVNVI
RSSSTGRVLD AAAALLGICE IRTYEGEPAM KLESAATKST HSVDLPIIFT NDNDSGVPLL
DTTELLLGAY ELSGKYPPVD LAFAVEESFA TGISELAISL AAKRGLEKIG LSGGVAYNNH
ITSCIARTVT EAGFEFLVHR QVPCGDGCIS FGQALAAGLS TKPENKF