Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0382 |
Symbol | |
ID | 3627208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 450601 |
End bp | 452904 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699273 |
Product | hydrogenase maturation protein |
Protein accession | YP_303945 |
Protein GI | 73667930 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG AAGCAAGGCT TCTTCATATT ACCGGTACTG TTCAGGGGGT AGGTTTTCGC CCTTTTATAT CTCAGCTTGC AAAAGTCCAT GGGCTTTTCG GATACGTGAA AAATCTTGGA AACTACGTGG AAATCCTTGT AGAGGGAAAT AAGGAAAGCC TTGATAATTT CATTAAAGAA ATCCCTGAAA AGAAACCTCC TCTGGCTAAA GTTAAAGAAA TCAAAACAAA AAATACCCCC TTTTTTGGGT ATTCGAAGTT TATTATCGTG CCCAGCGAAT CCGGAGTTTT TGAAAATTCC ATAATTCCTC CTGATACGGC TATTTGCGAA CAGTGCAGGT CTGAGATTTT TGATCCTTCT TCCAGGTATT TTCATTATCC TTTTACGGTC TGCACAAATT GCGGGCCCAG ATATACAACC GTCCGAACCC TTCCTTATGA CCGGGAAAAT ACCACTATGG CAGATTTTCC TCTTTGCCCG GAATGTGAAA CCGAATATAC CGATCCTCTC AACCGAAGAT ATCATGCCCA GCCTGTCTGC TGCCCAAAGT GCGGGCCAGA AATCTGGCTC TCGGACTCCG AAGGAAATGT CCTGGTAAAA GGTTATGAAG CAATTATACA TGCTTCTGAT CTCCTTCAAC AGGGCTCAAT TCTTGCTATA AAAGGATTTG GGGGTTTTCA TATAGCCTGC GATGCGCGAA AGGAGATGCC TGTAAATGAG CTTCGAAGAC GGTTAAGGCG TCCAGAACAA CCTTTTGCAG TCATGGCAAA AAATGCCGAA GTTGCGGAAA CCTTTGCAGA ACTTGAAGGT GTGGGAAGGG AATATTTAAC TTCTTACCGC CGGCCTATTA CCGTGCTTCC CAGCTCAAGG GAATCCGGCC TGGCAGAATC GGTTACTTCT GGCCTTCACA ATATAGGGGT TATGCTTCCC TATACAGGTA CACAGAATCT ACTTTTTGAT CGCGTACCTG ATGCGGTATA TGTTATGACC TCGGCAAATC TTCCAGGAAG GCCCATGGTT GTTGAGAATA AAGAGGCGCT TGAGAAACTT AAAGGGATTG TCGATTATTA CCTGCTGCAC AACAGGGTTA TTGCAAACCG GAACGATGAT ACGGTTATAA GGGTTGTGAA TGGAAAGGCT GCCTTTATTC GTCGTTCCCG CGGTTTTGTA CCTGAACCCG TAGAGCTGCC TTTCGAAGTT AAAGCTTCTA TAGGCGTTGG GGCTGAAATG AATTCTACGG TTACTGTGGC AAAAGGAAAG CTTGCCTATG TTTCTCAGTA TATAGGAAAT ACCAGTCATG TAGAAACCTT CAGATACCAT TCCGAGGTTG TCAGGCATCT AATCCAACTT ACCGGAATCG AGCCCCTCTA CTGGGGTTGT GACTTGCACC CTGCATTTAA CACAACACGT TTTGCGCTAA AGATGGGAGG GGAGGATACT CTTCAGGTTC AACATCATCA AGCTCACATG TTAGCGCTTA TGGCTGATAA CTCTCTCCCA CTGGATTCCC GAATTCTCGG AATTGCCCTT GATGGAGTGG GATATGGCAC TGACGGTACA GTCTGGGGAG GGGAACTCTT TGAATCTTCT TACTTTGGAT ACGAACGTAT TGGGCACTTA TTCCCTCAGC CGATGCCAGG TGGCGACCTT GCCTCGCGGA TACCTTCAAG AATGGTTTTG GGAATTCTTT TTGAGAAACT TGGGAGAGCA GAATTGGAAA AACTTCCCCT TTCTTTTCCG AAAGGAGCTA TGGAGTTTTC AACTGTGATG AAACAGCTTG AAACCGGGGT AAATGTTATC CGAAGCAGCA GTACAGGACG GGTACTGGAT GCTGCGGCTG CCCTGCTTGG AATCTGCGAG ATTAGAACTT ATGAAGGAGA GCCGGCAATG AAACTCGAAT CTGCCGCAAC GAAGAGTACC CATTCAGTAG ATCTTCCTAT CATTTTCACG AATGATAACG ACTCCGGAGT TCCTCTACTT GACACCACTG AGCTTCTCCT GGGGGCATAT GAGCTTTCCG GAAAGTATCC CCCTGTTGAT CTTGCTTTTG CGGTTGAGGA AAGCTTTGCA ACGGGAATTT CAGAACTTGC CATTTCTCTT GCCGCAAAAA GGGGGCTTGA AAAGATAGGC CTTAGCGGAG GAGTTGCTTA TAACAATCAC ATCACTTCGT GCATTGCAAG AACTGTTACA GAAGCGGGTT TTGAATTCCT GGTTCATCGC CAGGTTCCCT GTGGAGACGG ATGTATTTCA TTTGGGCAAG CTCTTGCGGC AGGGTTGAGC ACAAAACCTG AGAATAAGTT TTAA
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Protein sequence | MQNEARLLHI TGTVQGVGFR PFISQLAKVH GLFGYVKNLG NYVEILVEGN KESLDNFIKE IPEKKPPLAK VKEIKTKNTP FFGYSKFIIV PSESGVFENS IIPPDTAICE QCRSEIFDPS SRYFHYPFTV CTNCGPRYTT VRTLPYDREN TTMADFPLCP ECETEYTDPL NRRYHAQPVC CPKCGPEIWL SDSEGNVLVK GYEAIIHASD LLQQGSILAI KGFGGFHIAC DARKEMPVNE LRRRLRRPEQ PFAVMAKNAE VAETFAELEG VGREYLTSYR RPITVLPSSR ESGLAESVTS GLHNIGVMLP YTGTQNLLFD RVPDAVYVMT SANLPGRPMV VENKEALEKL KGIVDYYLLH NRVIANRNDD TVIRVVNGKA AFIRRSRGFV PEPVELPFEV KASIGVGAEM NSTVTVAKGK LAYVSQYIGN TSHVETFRYH SEVVRHLIQL TGIEPLYWGC DLHPAFNTTR FALKMGGEDT LQVQHHQAHM LALMADNSLP LDSRILGIAL DGVGYGTDGT VWGGELFESS YFGYERIGHL FPQPMPGGDL ASRIPSRMVL GILFEKLGRA ELEKLPLSFP KGAMEFSTVM KQLETGVNVI RSSSTGRVLD AAAALLGICE IRTYEGEPAM KLESAATKST HSVDLPIIFT NDNDSGVPLL DTTELLLGAY ELSGKYPPVD LAFAVEESFA TGISELAISL AAKRGLEKIG LSGGVAYNNH ITSCIARTVT EAGFEFLVHR QVPCGDGCIS FGQALAAGLS TKPENKF
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