| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0349 |
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| Symbol | |
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| ID | 3626593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 406711 |
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| End bp | 407763 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637699241 |
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| Product | tRNA splicing endonuclease |
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| Protein accession | YP_303913 |
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| Protein GI | 73667898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0895674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACAC AACTTAAAGG AGACCGGGTC CTTGCCGAAA AGGAAGCGGT AGCCGAATTT
TATAAAACAG GTTACTTCGG GCGTCCTAAA GGCGAAGGGC TTGAACTCTC GCTTGTAGAA
GCTGCTTTTC TTCTGTCCAG AGGAAAGCTC GAGATCGAAC TCGAAGGCAC AATGCTCGAT
TTCAGATACT TTTTCGAACA GGCTTCTTTG AGGCAGCCGA ATTTTGAGCT GAAATATATA
GTTTATAAGG ACCTTAAAGA AAGAGGGTAT TATGTTCAGC CATCAGCTGC GGATTTCCGG
GTATATCCCA GAGGCAGCCA CCCAGGTAAA AGTGCAGCAA GAATTTTTGT TCATGTCCAG
TCTGAAAGGC AGCTCCTTCC CGTAAAACTT CTTCAGGACT CAGTTATCTC GGCAGAGAAC
GTGCATAAGC AGTTTATCCT TGCTGTGGTG GATGAAGAAA GTGACCTTAC CTTCTATGAG
GTTAAAACCG CAGTTCCCAA AGGAGAAATG ACTGAGCCAT ATCCTGCCAT CAAAACCGAT
GCTACTTTCC TGGAAGACAG GGTAATAGCC TGGGATGCTC AGGCTTCGGA AACTCTCTAT
AAAAGGGGTT TTTACGGAAA AATGCTGGAT TCCGAGAGGC TGCAACTTTC CCTGGTCGAA
TCCCTTTACC TCTTTTCCAG AGGCATAATA ACGGTTCGGG ACAGGAAAGG TAAAGTGTTT
TCATTTGACG AATTTATCGA GAAAGCTTCG GAGATTGAAA GCTTTTTCCT GAGAAAGTAC
AGTGCATATA AAAATCTCAG GGATTCGGGG CATGTGGTCA AAACCGGTTT TAAATTCGGG
ACAAATTTCA GAGTATACAG AAAGGTAGAG TCAATAGAGA AAATACCTCA TTCGGAATAC
CTTGTAAATG CCATCCCTGC GGATTTTGAG TTCAGGCTTT CGGTTATGTC CGGAGCTGTC
AGGCTTGCAA ACAGCGTCAG GAAAAAAATG CTTTTTGCGG TTGAGAAAGA CGAGGAAATC
GAGTACCTGG ACATCAGCCG GACGAAGATG TAA
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| Protein sequence | MKTQLKGDRV LAEKEAVAEF YKTGYFGRPK GEGLELSLVE AAFLLSRGKL EIELEGTMLD
FRYFFEQASL RQPNFELKYI VYKDLKERGY YVQPSAADFR VYPRGSHPGK SAARIFVHVQ
SERQLLPVKL LQDSVISAEN VHKQFILAVV DEESDLTFYE VKTAVPKGEM TEPYPAIKTD
ATFLEDRVIA WDAQASETLY KRGFYGKMLD SERLQLSLVE SLYLFSRGII TVRDRKGKVF
SFDEFIEKAS EIESFFLRKY SAYKNLRDSG HVVKTGFKFG TNFRVYRKVE SIEKIPHSEY
LVNAIPADFE FRLSVMSGAV RLANSVRKKM LFAVEKDEEI EYLDISRTKM
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