Gene Mbar_A0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0347 
Symbol 
ID3626591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp403960 
End bp404757 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID637699239 
Productnitrogenase iron protein subunit NifH 
Protein accessionYP_303911 
Protein GI73667896 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAACC AGAAGATCAT AGCGATCTAC GGAAAGGGCG GCATAGGTAA ATCGAGTACA 
GCTTCAAACG TTGCCGCTGC CTGCGCCGAG GCAGGAAAGA AGGTTATGAT TATAGGCTGC
GATCCTAAAA GTGACTCATC AATCACCCTT CTAAGAGGCA GGAGAATTCC AACCATTCTC
GACCTCCTGC GTGAGGGTGT GGACATAAAG AAAGAAGATG TGGTCTTTGA AGGATATGCA
GGCGTCAAAT GCGTGGAAGC AGGCGGCCCA GAACCAGGCA TAGGTTGTGC AGGGCGAGGA
ATCATTGTTG CCATCCAGAA ATTGAAGAGC ATTTCAGGAA ATCTCTTAAA AGAGCAGGAT
TTGATCATTT ACGATGTGCC CGGAGACATA GTCTGCGGAG GGTTTGTCGC CCCTGTCAGG
AAAGGATTCG TAAATGAAGC TTATGTCCTG ACCTCAGGAG AGTACATGCC CCTTTATGCA
GCAAATAATA TATGCAAAGG CTTATCGAAG ATAGGAATGC CGCTTAGCGG GGTAATCTGT
AATTCAAGAA ACGTGAGCAG GGAAGAGGAA ATCGTTTCGA AGTTTTCTGA GGAGATCGGC
AGCCAGCTTA TGGCTTTTAT CCCGAAGAGG CAGGTAGTTC AGGACTGTGA AAGAGAAGGT
TACTCGGTAA TGGAAAAAGC GCCTGAATCC GATATTGCAG AGATCTACCG CAAACTCGGA
AAAGCAATCC TTGAAAACGA AAAACGAGTT ACAGCCGATT CCCTTAGTGA TGAACGGTTG
AGGGAATTAA CAAAATAA
 
Protein sequence
MKNQKIIAIY GKGGIGKSST ASNVAAACAE AGKKVMIIGC DPKSDSSITL LRGRRIPTIL 
DLLREGVDIK KEDVVFEGYA GVKCVEAGGP EPGIGCAGRG IIVAIQKLKS ISGNLLKEQD
LIIYDVPGDI VCGGFVAPVR KGFVNEAYVL TSGEYMPLYA ANNICKGLSK IGMPLSGVIC
NSRNVSREEE IVSKFSEEIG SQLMAFIPKR QVVQDCEREG YSVMEKAPES DIAEIYRKLG
KAILENEKRV TADSLSDERL RELTK