Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0315 |
Symbol | ubiA |
ID | 3626830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 368622 |
End bp | 369473 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699207 |
Product | prenyltransferase |
Protein accession | YP_303879 |
Protein GI | 73667864 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGGC CGAAAATTCT AGGGCTGTTC CGCTTATTCC GTTTTGAACT GCCATTTACT GCAGGAGTAT GCGTGATACT GGGAGAGTTA CTGGCATTAG GTACACTTCC TACCACAACT GAAATTGTAT TGGGGTTTCT AAGCATTTTT TTTATTTCGG CTACGTCTCT CATTCTTAAC GACTATTTTG ATCTCGAAAT TGACAGAATA AATGCACCCG AAAGACCACT CCCAGCAGGC CTTGTTACTG AGCGAGAAGT CGTTTTACTC TCCATTGTTG TGGCAATACT TGGACTTATC ACAAGTTACC TGATTAGTTT AGAGGCTTTA TTAGTAGTTA TTCTGGTCTG GGCAGTTGGT TTGCTTTACA ACTGGCGGTT CAAAAAGGCT GGTCTTATTG GAAATCTAAT GGTCAGCTTT TCGGTTGGAA TGACTTTTAT TTTTGGTGGT ATAGCAGTAA ACAAACCATT TGAAATAATA GTCTGGTTTT TTGCGGTTAT AGTAATGCTT GTAGATTTAG GAGAAGAGAT TGCGGCAGAC GCTATGGATA TTGAAGGTGA TAGGCAGGCA GGGTCACGTT CCCTGGCCCT GGTAATTGGT CGCGAAAAAG CATTGAAAAT CAGCGGAGCA GCTTTCTTAC TGGTAGTTGC TGCAAGTATC ATGCCGTTTT TGTTGGGCTG GTTAGAACGG ATTTATCTGT TTCCTATTTT ACTGATGGAC CTGGTTATTC TGTACTCAAC AGGTAAATTG TTAGACTCAA GAACAGTAAA TCGACGAATT TACATTCGCT GGATATACCT GACTGGATTG GTGGCATTCT TAATTTTCAT ATTCATTCGA ATAGTCACGT GA
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Protein sequence | MLRPKILGLF RLFRFELPFT AGVCVILGEL LALGTLPTTT EIVLGFLSIF FISATSLILN DYFDLEIDRI NAPERPLPAG LVTEREVVLL SIVVAILGLI TSYLISLEAL LVVILVWAVG LLYNWRFKKA GLIGNLMVSF SVGMTFIFGG IAVNKPFEII VWFFAVIVML VDLGEEIAAD AMDIEGDRQA GSRSLALVIG REKALKISGA AFLLVVAASI MPFLLGWLER IYLFPILLMD LVILYSTGKL LDSRTVNRRI YIRWIYLTGL VAFLIFIFIR IVT
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