Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0300 |
Symbol | |
ID | 3626815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 352165 |
End bp | 352839 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637699192 |
Product | hypothetical protein |
Protein accession | YP_303864 |
Protein GI | 73667849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0849732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGAGA AAACAAAAGC CAGCTCGTCT CGCTTTTTTA AAGAAGAAGT CCACTGCTAC GGAGTAAAGT CTGCGCTCGT GGGAAGAATT GCGAAAAATT ATTTTAACCA AATAAAGTCC GAAGACAAAA AAGAAATCTT TGACCTGTGT GAGGAACTCT TTCGATCCGA TTACTGCGAG GAAGCCTTTA TTGCAGCCAA TTGGGCCTAC CTGGTCAGAA AGGATTACTC TGAGGATGAT TTCTTTACCT TTGAGCGCTG GGTTGAAAAC TATGTCAACA ACTGGGCGAA GTGTGACACC CTCTGCAACC ATGCAGTTGG CTCTTTTATA GAGAAATTTC CTGAATATGT GGAAAAACTC AAGCTCTGGG CCCTGTCTGA CAACCGGTGG GTAAGACGAG CGGCTGCAGT AACCCTGATC CTGCCTGCCC GAAAAGGCAA TTTTCTTAAC GAGGTTTTTG AAATCTCCGA TCTCCTGCTT AAAGACAGAG ATGACCTGGT CCAGAAAGGC TACGGCTGGA TGCTTAAAGA AGCCAGCAAA TCCCACAGGC AGGAAGTCTT CGAATACGTG ATGAATAACA AAAAAGAGAT GCCCAGAACC GCTCTCAGAT ATGCAATCGA GAAAATGCCA CCGGATTTGA GAGCCAGAGC TATGGAAAAA AACTGGAAAA AATAA
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Protein sequence | MDEKTKASSS RFFKEEVHCY GVKSALVGRI AKNYFNQIKS EDKKEIFDLC EELFRSDYCE EAFIAANWAY LVRKDYSEDD FFTFERWVEN YVNNWAKCDT LCNHAVGSFI EKFPEYVEKL KLWALSDNRW VRRAAAVTLI LPARKGNFLN EVFEISDLLL KDRDDLVQKG YGWMLKEASK SHRQEVFEYV MNNKKEMPRT ALRYAIEKMP PDLRARAMEK NWKK
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