| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0294 |
|---|
| Symbol | |
|---|
| ID | 3624414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 344733 |
|---|
| End bp | 345920 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699186 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303858 |
|---|
| Protein GI | 73667843 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTCGAATAGG AATGTTTACC TGGGAAAGTC TGTATTCGAT ACGTGTAGGA
GGTATTTCAC CCCATGTATC CGAGCTCTCT GAGGCTCTTG CGACAGAGGG ACATGATGTT
CACCTTTTTA CACGAGACCA TGAAAATAAA GATGAGATAA TAAATGGGGT TTATTATCAC
AAAATTGCCT GTGATCAAAG CGGGGGAATC GTTGAGCAGA TGAACCATAT GTGTGATGAT
ATGTACTGCC GATTCCTCGA GGTGAGAGAA AATGTAGGAG AGTTTGACAT CCTGCATGGG
CACGACTGGC ACCCTGTAAA TGTGCTTTGC AGGATAAAAG CCCAGTTTGG ACTGCCCTTT
GTGCTGACCT TCCACAGTAC AGAATGGGGA CGTAATGGAA ATCATCATGG AGACTGGTGG
GAGGCAAAGG AAATCTCACA TAGGGAGTGG CTCGGAGGCT ATGAATCTTC GGAGATTATC
ATAACCTCGA CCATATTGAA GGAAGAAATC AAGCAAATTT ACAAAATCCC TGACTACAAG
CTCTGGAAAA TCCCTAACGG CATAAACGTG GGAAAAATAA ATAGACAGAT CGATCCCGGG
AATGTGAAAA AACACTATGG TATCCATCCA TGTCTTCCAG TGGTGCTTTT CACGGGAAGG
ATGTCTTATC AGAAAGGGCC TGACCTGCTG GTGGAAGCTG CTGCTAAAGT CCTGAAGAAG
AGGAATGCTC AGTTTGTGCT TATAGGCGAG GGGGAAATGC GTTCTCATTG TGAATATCAG
GCTCATAGGC TTGGGATTGG AAATTCCTGT AATTTCCTCG GGTATGCTCC GGATAATACT
TTGATAGACT GGTTCAATGC CTGTGACCTC GTATGTGTGC CAAGCCGGAA CGAGCCCTTT
GGAATTGTAG TGCTTGAAGC CTGGGATGCA AAAAAGCCTG TAGTTGCAAG TGATGCAGTT
GCCCTTGTAG ATAATTTCAG GACAGGCGTC GTTGCACATA AAGAACCCTC TTCGATCGCC
TGGGGCCTTA ATTACGTCCT TGAAGGTCTT GGCCGCAACC GAATGGGAGA GAAAGGTTAC
GATCTTCTTA AAAAGCGGTA TAACTGGAAA ACCATAGCTG AAAAAACTCT TGAAGCCTAC
AAAAAAGTAA TCGAAAAACA TGAGACTGCG GCAGGAAAAG TCAGCTGA
|
|---|
| Protein sequence | MKKIRIGMFT WESLYSIRVG GISPHVSELS EALATEGHDV HLFTRDHENK DEIINGVYYH
KIACDQSGGI VEQMNHMCDD MYCRFLEVRE NVGEFDILHG HDWHPVNVLC RIKAQFGLPF
VLTFHSTEWG RNGNHHGDWW EAKEISHREW LGGYESSEII ITSTILKEEI KQIYKIPDYK
LWKIPNGINV GKINRQIDPG NVKKHYGIHP CLPVVLFTGR MSYQKGPDLL VEAAAKVLKK
RNAQFVLIGE GEMRSHCEYQ AHRLGIGNSC NFLGYAPDNT LIDWFNACDL VCVPSRNEPF
GIVVLEAWDA KKPVVASDAV ALVDNFRTGV VAHKEPSSIA WGLNYVLEGL GRNRMGEKGY
DLLKKRYNWK TIAEKTLEAY KKVIEKHETA AGKVS
|
|---|
| |