Gene Mbar_A0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0290 
Symbol 
ID3624410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp340238 
End bp341095 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content40% 
IMG OID637699182 
Producthypothetical protein 
Protein accessionYP_303854 
Protein GI73667839 
COG category[S] Function unknown 
COG ID[COG1967] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.51391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTT CAATAGATAA TATCTCACAG TTTATTAATA CCTATTATCT TGACCCCATA 
AGAGGTGATG AAGGGTATAA TACTGTAAAT ACCGTTACCT GGGCAATAAT ATTGGGTATT
TGTATATTTG GGGTTTTCAG GCTGCTCGAA AAGCTTGAGG TAAAAATAAC TCCTCGATTT
ATTGCGTCTG TCCTGCCTTT CGTACTTGCA GGGTCTTCTC TGCGTGTAAT TGAAGATTCT
CCTGCAGGTA TCTTCCACCC ACCATTTAGC TATCTTCTCA TAACCCCCAA TATTTACTTC
ATGGTTTTTG CGATAACCGT AGGTTGTCTC TGGATTTCAA TCCGGATGCA GAAAGCAGGG
CTTGTAAAGG ATTTTCATCT CACCTTTGCA GGCTTCGGAC TCGCATTGTT TTTCATAAAT
CTTGCTGTCC TCCTCCATTT CGATACTATA GTATACCCTT ACGTTCCCGT ATTCGTAATC
GTGGCAGGAA TCGGTCTAAC CTTTATCTTT TATCTTATTG CCCGTCATTT CAAGTCCTCA
ATATTCACCA ATCCACTGAA CCTTTCTATC CTGATGGCTC ACTTGATGGA TGCTTCTTCA
ACATACATAG GAATAGATCA TCTTGGATAC TTTGAAAAGC ATGTAGTGCC CACTTATCTT
ATTAACTTGA CTGGCACCGC ATTGGTTATG TATCCATTAA AGCTTATTAT CTTCGTAGGG
GTTCTTTATG TGCTTGACAC TCAGTTTGAG GATGACGAGC GTTCCTTGAA CTTGAAAGTA
CTAATAAAAA TGGTCATTTT GATCCTTGGG CTTTCTCCTG CAACTCGGAA CACGATCCGG
ATGATGATGG GAATTTGA
 
Protein sequence
MSFSIDNISQ FINTYYLDPI RGDEGYNTVN TVTWAIILGI CIFGVFRLLE KLEVKITPRF 
IASVLPFVLA GSSLRVIEDS PAGIFHPPFS YLLITPNIYF MVFAITVGCL WISIRMQKAG
LVKDFHLTFA GFGLALFFIN LAVLLHFDTI VYPYVPVFVI VAGIGLTFIF YLIARHFKSS
IFTNPLNLSI LMAHLMDASS TYIGIDHLGY FEKHVVPTYL INLTGTALVM YPLKLIIFVG
VLYVLDTQFE DDERSLNLKV LIKMVILILG LSPATRNTIR MMMGI