Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0289 |
Symbol | |
ID | 3624409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 339419 |
End bp | 340159 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637699181 |
Product | integral membrane protein |
Protein accession | YP_303853 |
Protein GI | 73667838 |
COG category | [S] Function unknown |
COG ID | [COG1300] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.271645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGAG ATGATGATTA TAATCCAGAT GAGATAAAAG AAGGTGTACA GGCTGCAGGA ACTCCTGAAG GGGAGATGGA AAACAGGGAA TATGCTGCAG AAGAGAAAGA GTTCTTTCCC GGAAGCAGCA CGTCGGAAAC ATGGCACGAT AGCGGAAAAG ACCCAAAAAA AGGGTTTAAA TATCTGCAAT TTATCTGGCC CTATGCACTT CTTATGGCCT TTATATTTTT TGTATTTTTA GTTGTAGGCT ATTATTCGGC TGCAAGTTTC CCTTATATGG CTGAGACTCT CAGAGAAAGC TTTAGCTCCC GTTTTTCATC AATCATGACA ATGATCCCTC TTTTCATAAT GTTTGCAATT TTTCTTAATA ATGCCTTTTT AAGCCTGCTT TTTCTAGTAC TCGGGCTGGC TCTGGGAATT CTTCCATTAC TTTTTATCGC CTTTAATGGA TATGTTGTGG GAGTTGTTGT TTATCTTATA GCTCAGGAAA GAGGAATGCT TTTTATTTTG CTTGGTCTTC TTCCCCACGG GATACTGGAA TTGCCTATGG TTTTCCTTTC TGCAGGCATA GGTCTTCGGC TCGGATACCA GGTATTTTCT GCCCTTATAG GGAGACCCAC CAATATAAAA AGAGAATTCA AAGAGGGACT TACGTTTTAT TTCCACTGGA TCTTGCCTCT TCTTCTGGTT GCAGCCATAA TTGAGACTTT TATTACGCCT ATTATCCTTA ATTCGATTTA A
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Protein sequence | MERDDDYNPD EIKEGVQAAG TPEGEMENRE YAAEEKEFFP GSSTSETWHD SGKDPKKGFK YLQFIWPYAL LMAFIFFVFL VVGYYSAASF PYMAETLRES FSSRFSSIMT MIPLFIMFAI FLNNAFLSLL FLVLGLALGI LPLLFIAFNG YVVGVVVYLI AQERGMLFIL LGLLPHGILE LPMVFLSAGI GLRLGYQVFS ALIGRPTNIK REFKEGLTFY FHWILPLLLV AAIIETFITP IILNSI
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