Gene Mbar_A0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0289 
Symbol 
ID3624409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp339419 
End bp340159 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID637699181 
Productintegral membrane protein 
Protein accessionYP_303853 
Protein GI73667838 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.271645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAG ATGATGATTA TAATCCAGAT GAGATAAAAG AAGGTGTACA GGCTGCAGGA 
ACTCCTGAAG GGGAGATGGA AAACAGGGAA TATGCTGCAG AAGAGAAAGA GTTCTTTCCC
GGAAGCAGCA CGTCGGAAAC ATGGCACGAT AGCGGAAAAG ACCCAAAAAA AGGGTTTAAA
TATCTGCAAT TTATCTGGCC CTATGCACTT CTTATGGCCT TTATATTTTT TGTATTTTTA
GTTGTAGGCT ATTATTCGGC TGCAAGTTTC CCTTATATGG CTGAGACTCT CAGAGAAAGC
TTTAGCTCCC GTTTTTCATC AATCATGACA ATGATCCCTC TTTTCATAAT GTTTGCAATT
TTTCTTAATA ATGCCTTTTT AAGCCTGCTT TTTCTAGTAC TCGGGCTGGC TCTGGGAATT
CTTCCATTAC TTTTTATCGC CTTTAATGGA TATGTTGTGG GAGTTGTTGT TTATCTTATA
GCTCAGGAAA GAGGAATGCT TTTTATTTTG CTTGGTCTTC TTCCCCACGG GATACTGGAA
TTGCCTATGG TTTTCCTTTC TGCAGGCATA GGTCTTCGGC TCGGATACCA GGTATTTTCT
GCCCTTATAG GGAGACCCAC CAATATAAAA AGAGAATTCA AAGAGGGACT TACGTTTTAT
TTCCACTGGA TCTTGCCTCT TCTTCTGGTT GCAGCCATAA TTGAGACTTT TATTACGCCT
ATTATCCTTA ATTCGATTTA A
 
Protein sequence
MERDDDYNPD EIKEGVQAAG TPEGEMENRE YAAEEKEFFP GSSTSETWHD SGKDPKKGFK 
YLQFIWPYAL LMAFIFFVFL VVGYYSAASF PYMAETLRES FSSRFSSIMT MIPLFIMFAI
FLNNAFLSLL FLVLGLALGI LPLLFIAFNG YVVGVVVYLI AQERGMLFIL LGLLPHGILE
LPMVFLSAGI GLRLGYQVFS ALIGRPTNIK REFKEGLTFY FHWILPLLLV AAIIETFITP
IILNSI