Gene Mbar_A0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0278 
Symbol 
ID3624398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp328027 
End bp328590 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content45% 
IMG OID637699170 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_303842 
Protein GI73667827 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.885996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAG TCGTGTTTGT TACAGGAAAT AAAGGCAAAT TTGCCGAGGT AAGGGACATC 
CTCAAGACTT TTGAACTTGA AGTAGTTCAG GACAAAAACG GCTACCCTGA ACTTCAGGAG
GACGACCTTG AGCCCATTGC GGCCTATGGG GCACAGTATG TTGCAAACAA AATGAACATG
CCTGTAATGG TAGATGATTC CGGGATTTTC ATAAAAGTCT TAAACGGCTT TCCAGGCCCA
TATTCTCGTT TTGTAGAGGA TAGGCTCGGA AATCCGAAAG TGCTTAAGCT CATGGAAGGG
GAAACTGACA GGACAGCGTA TTTTAAGACC GTTATCGGAT ACTGTGAGCC TGGAAAAGAA
CCTCTGGTTT TCCCAGGTGT AGTTGAAGGG GAAATCGCGT ATGAAGAGAG GGGTACAGGC
GGTTTTGGGT ACGACCCTAT TTTTGAGTAC CAGGGCATAA CCTTCGGGGA ACTCGGAGAT
GTTGAGAAAA ATAAAGTTTC CCACCGACGC AGGGCCATTG ACAGTTTTCT AGAATGGTAT
AAGGGTAAAC TTGAAAAAAC CTGA
 
Protein sequence
MHKVVFVTGN KGKFAEVRDI LKTFELEVVQ DKNGYPELQE DDLEPIAAYG AQYVANKMNM 
PVMVDDSGIF IKVLNGFPGP YSRFVEDRLG NPKVLKLMEG ETDRTAYFKT VIGYCEPGKE
PLVFPGVVEG EIAYEERGTG GFGYDPIFEY QGITFGELGD VEKNKVSHRR RAIDSFLEWY
KGKLEKT