Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0278 |
Symbol | |
ID | 3624398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 328027 |
End bp | 328590 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637699170 |
Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
Protein accession | YP_303842 |
Protein GI | 73667827 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.885996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAG TCGTGTTTGT TACAGGAAAT AAAGGCAAAT TTGCCGAGGT AAGGGACATC CTCAAGACTT TTGAACTTGA AGTAGTTCAG GACAAAAACG GCTACCCTGA ACTTCAGGAG GACGACCTTG AGCCCATTGC GGCCTATGGG GCACAGTATG TTGCAAACAA AATGAACATG CCTGTAATGG TAGATGATTC CGGGATTTTC ATAAAAGTCT TAAACGGCTT TCCAGGCCCA TATTCTCGTT TTGTAGAGGA TAGGCTCGGA AATCCGAAAG TGCTTAAGCT CATGGAAGGG GAAACTGACA GGACAGCGTA TTTTAAGACC GTTATCGGAT ACTGTGAGCC TGGAAAAGAA CCTCTGGTTT TCCCAGGTGT AGTTGAAGGG GAAATCGCGT ATGAAGAGAG GGGTACAGGC GGTTTTGGGT ACGACCCTAT TTTTGAGTAC CAGGGCATAA CCTTCGGGGA ACTCGGAGAT GTTGAGAAAA ATAAAGTTTC CCACCGACGC AGGGCCATTG ACAGTTTTCT AGAATGGTAT AAGGGTAAAC TTGAAAAAAC CTGA
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Protein sequence | MHKVVFVTGN KGKFAEVRDI LKTFELEVVQ DKNGYPELQE DDLEPIAAYG AQYVANKMNM PVMVDDSGIF IKVLNGFPGP YSRFVEDRLG NPKVLKLMEG ETDRTAYFKT VIGYCEPGKE PLVFPGVVEG EIAYEERGTG GFGYDPIFEY QGITFGELGD VEKNKVSHRR RAIDSFLEWY KGKLEKT
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