Gene Mbar_A0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0270 
Symbol 
ID3624979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp320925 
End bp322058 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content45% 
IMG OID637699162 
Producthypothetical protein 
Protein accessionYP_303834 
Protein GI73667819 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.244149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA AGGTCTCAAT TGTTGAATGC CAGGACTACT CGGATGCTAA AAAAGCAGTA 
AAAGAAGCAC TGAACCTGAT AGGTGGACTT GAGAAGGTTA TAGTTCCTGG CAGCCGCGTG
CTCCTCAAAC CCAATGTGCT TTCTATCCGA CCACCAGAGG ATGCCGTCAC CACCCATCCG
GCGATAGTGT CCGCTATGTG CGAACTGGTC TTGGAAGCTG GAGGCATTCC AGTCATAGGA
GATGGGTCCG GCATTGTAAA ACCCGGAACT ACTACAACTT CGCAAGCGCT TAAAGCGTCC
GGCATTGAGG ATGTTGCTTC CGATCATGGG GTTGAACTTA TCAATTTTGA GACCTCAGGT
TTTATTGAAG TTGATGTTCC GGGCGCAAGG CAGTTTTCTC ATCTGTACAT CTCAAAAGCT
GTACTTGAGG CAGATATAGT AATCTCGCTT CCAAAGCTTA AGACCCATGA ACTTACATTG
TATACGGGGG CAATCAAAAA TTTCTTCGGC GCCATACCTC AGAAAACCAG AAAACAAGCT
CATTTCCTGG AAGACCGCCG CCGTTTTGGG GAAGCGGTTG TGGATATATA TTCTGTTGTC
AAGCCCCAGC TTGCAGTTAT GGATGGGGTA ATCGGAATGG AAGGAAATGG CCCATCCAAT
GGTACACCTG TCCTTGCAGG TGTAATTATG GCAAGTTATA ACTGTGTAGC CCTGGATATT
GTAGCCTCTG AGCTTATAGG AATCGATCCT TTAAAGGTCC CTACAAATAA AGCTGCACTC
GAAAGAGGTT TCGGAACCGA ACATCCCGAA ATTATAGGAG TACCTCTGGA AAAGATAAAG
GTCAGATTCA AAAGCCCTGA AGGTGGAATA ACTGCTTACA TGCCAGCTTT CCTTATGAGA
ATCCTTAGAA AGCAGTTAGC TGTAAGACCA ATTATTAACA CTTCAAACTG TGCACTTTGT
AAAGCCTGCG TTTCGAACTG TTCGGCACAT GCCATAGAGG AAATAAACCG AACACTCAAA
ATTAACGAGG AAAAGTGCAT TCACTGTTAT TGCTGCCGCG AACTTTGCCC TAATGATGCG
GTAGAATTAA AAAAATCACT GCTTATGAAG CTTGTAAGCA GAGGCAAAAG TTAA
 
Protein sequence
MNTKVSIVEC QDYSDAKKAV KEALNLIGGL EKVIVPGSRV LLKPNVLSIR PPEDAVTTHP 
AIVSAMCELV LEAGGIPVIG DGSGIVKPGT TTTSQALKAS GIEDVASDHG VELINFETSG
FIEVDVPGAR QFSHLYISKA VLEADIVISL PKLKTHELTL YTGAIKNFFG AIPQKTRKQA
HFLEDRRRFG EAVVDIYSVV KPQLAVMDGV IGMEGNGPSN GTPVLAGVIM ASYNCVALDI
VASELIGIDP LKVPTNKAAL ERGFGTEHPE IIGVPLEKIK VRFKSPEGGI TAYMPAFLMR
ILRKQLAVRP IINTSNCALC KACVSNCSAH AIEEINRTLK INEEKCIHCY CCRELCPNDA
VELKKSLLMK LVSRGKS