| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0243 |
|---|
| Symbol | |
|---|
| ID | 3624856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 289042 |
|---|
| End bp | 291564 |
|---|
| Gene Length | 2523 bp |
|---|
| Protein Length | 840 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637699135 |
|---|
| Product | transmembrane oligosaccharyl transferase |
|---|
| Protein accession | YP_303807 |
|---|
| Protein GI | 73667792 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTC AGGATCATCC TGTATCATCA ATTCAAAACA AAATCAAGTC CAGCTGGCCT
TATACACTGG CAGTTGCGAT AATCGGTTTT ATATCTCTAT GGGTCAGAAC ACTTCCTTCA
GATTCAGTGT TCTTATCCGA TGGATCAGTA AAGTTTGCGA CCAACGATGC ATGGTACCAT
ATGCGTACCT TAAGGGTTCT GCTTGAAAAC TACCCCCACC GGATGTTTTT CAATCCTATG
ACCAACTATC CTACTGGAAG TTACATACAT TTTGGTCCAT TGTTCGATCA AATGATGGCT
GTTACTTCAC TGATTCTAGG TCTGGGCCAT CCCAGCTCTC ATCTTGTTGA CACTATAGGA
GCTTATTTTC CTGCAGTTCT CGGAGCTCTG ACTGTCATTC CGGTTTACTA CATAGGCAAA
TATCTTGGAG GCCATAAAAC AGGGATTCTG GCTGCGATCC TGATTGCATT TGCTCCAGGG
CAGTTTCTGT CCCGTTCAAT GATCGGCTTC ACAGACCATC ATGTTGCCGA GTCGCTATTC
AGTACTTTCT TCATGATGTT TTTCATGCTG GCTTTGATTT CAGCAAAGAA AAAAAAGCTG
CGTTTTGAAG ACGTGTTCAA TAAGAAATTC ACTGTCCTGA AAGAACCGTT TATATACTCA
GTTCTGGCGG GAGTCATGTA CTCAGCCTAC CAACTTTGCT GGCCAGGAGG TTCGCTGTTC
TTATTAATAG TTCTGGTTTA CGCTATATTC CAGTATATCT TGGACAACTT CAGGAATGAG
TCCAGTGACT ACCTTGGATT TACAGGCATA GTCACCTGTC TGGTAAGTAC AATACTTATC
CTTCCATTTG TCCATCCAGA TATGGGGTTT TCTATGTACT ATTACTCATG GTTCCATGTT
ATCACATCCA TTGGAACAAT GGCAGGCTTT GTGGCTTTGA GTCTCATTGA AAGGGAATTC
AAAAGAAAGC AGATGAAGGC TTATTACTAC CCTCTACTAA TCATAGGAGT TGGAATTCTC
GGGCTTATAT TTATCAAGGT TTTATCTCCA TCACTTTATT CCCTGATTAT AAACGCTCCA
AGTACTGTTT TTGGGATTCA ACAGGGAGGA CCTTCAACAA TTGGTGAAGC TACTTCTATA
TTTTATAATA GTGGCGTCTT TACCCTGTCT AAAGCTTTTT CAAATTTCAC TACTGCGGGA
TTTCTCGCTT CTATTCTAGG AATGCTTATT CTGGCTGCAA ACCTGTTTAG AAGACCAAAG
CCTCAGGAAT TTCTGGTTCT TGTCTGGAGT TTCTTTATTC TCCTCGCAAT TTACGGACAG
AACCGTTTTG CATACTACTA TTCAATAAAC GTTTCAATCC TGAGTGCATA TCTGGGAGGC
CTGTTACTTG AAAAAGTGAA ATGGAGTGAA CTTGACCAGA AGTTCAAAAG TAATGTAAAA
TCGCTTGCAG ATGTCCCGAA AGCATTGAAA TTCGTCAAAG TACAGCAGGT TTTAGCAGTC
CTGCTTATAG TGGTATTTCT GATCTATCCG GTATATGCAT ATGCAATGCT ATATGCAGTT
GGCTCAGACG AGCCAAATGA GCCGTGGACG GAAGCCTGTA ACTGGCTTCG CTCAAACACC
CCGGATCCTG GTATGAACTA CAATGCCGTT TACGAAGCCC CGAAAAACGG AGAACTTTTC
AATTATCCTG ATACTGCCTA TGGTGTTATG TCCTGGTGGG ATTACGGACA CTATATAGAG
ACAATAGGGC ACAGGATGCC AAATGCGAAC CCATTCCAGG CAGGAATAGG AGGTCGCAGG
GTAAGCATTA ACGAGACAAA TCAGCCAGGA GCTGCAACCT TCTTCACAGC CCCATCGGAA
GAAGAAGCAA GTGCAATACT TGAAGCCATA GACCCAAGGT CCGACAAATC AGGCTCACGA
TATATAATGT CTGATGCCAG AATGGCTACA GAGATATTCG GGGCAATGCC TGCCTGGACT
CTTGATACTG ATGGTTACTA TCAGGCTTAC TGGACAGGCA GCCAATATCA GAGCATACCA
TCTACCCGAT ATTATAATTC CATGGAAGCA AAACTGCATA TTTTTGACGG AAACGGCTTG
AAACAGTACC GTATGGTTCA CGAGACTGAG GCCTACCAAA CTGACGAGGT AGGGTATAAA
CAGATATACA ATTACTTCTA CGGAGGCAAA CTCTCAGAAG TAAATACCGG TTATGTAAAA
ATTTTCGAGT ACGTCAAAGG TGCAAACATA ACAGGCACGG CTTCCCCCAA TGAGACCGTT
AATATAAATA CGACAATTCT TACGGATCAG GGAAGGACCT TTGAATACTC GCAGTCAACA
ACTACAGACT CTCAGGGAAG GTACGAGTTC ACAGTGCCTT ATTCAACCGA CGGCCCAATT
ACAGGAGAAA CCCAGTTTGA TACTGCACCT TCAGGACCCT ATGTATTGAG CTATGGCGAT
ACGACAAAAG AAGTGAAAGT AAGTGAGGAA GCTGTATTAA AGGGAGAACA AATAAAGGTA
TAA
|
|---|
| Protein sequence | MSSQDHPVSS IQNKIKSSWP YTLAVAIIGF ISLWVRTLPS DSVFLSDGSV KFATNDAWYH
MRTLRVLLEN YPHRMFFNPM TNYPTGSYIH FGPLFDQMMA VTSLILGLGH PSSHLVDTIG
AYFPAVLGAL TVIPVYYIGK YLGGHKTGIL AAILIAFAPG QFLSRSMIGF TDHHVAESLF
STFFMMFFML ALISAKKKKL RFEDVFNKKF TVLKEPFIYS VLAGVMYSAY QLCWPGGSLF
LLIVLVYAIF QYILDNFRNE SSDYLGFTGI VTCLVSTILI LPFVHPDMGF SMYYYSWFHV
ITSIGTMAGF VALSLIEREF KRKQMKAYYY PLLIIGVGIL GLIFIKVLSP SLYSLIINAP
STVFGIQQGG PSTIGEATSI FYNSGVFTLS KAFSNFTTAG FLASILGMLI LAANLFRRPK
PQEFLVLVWS FFILLAIYGQ NRFAYYYSIN VSILSAYLGG LLLEKVKWSE LDQKFKSNVK
SLADVPKALK FVKVQQVLAV LLIVVFLIYP VYAYAMLYAV GSDEPNEPWT EACNWLRSNT
PDPGMNYNAV YEAPKNGELF NYPDTAYGVM SWWDYGHYIE TIGHRMPNAN PFQAGIGGRR
VSINETNQPG AATFFTAPSE EEASAILEAI DPRSDKSGSR YIMSDARMAT EIFGAMPAWT
LDTDGYYQAY WTGSQYQSIP STRYYNSMEA KLHIFDGNGL KQYRMVHETE AYQTDEVGYK
QIYNYFYGGK LSEVNTGYVK IFEYVKGANI TGTASPNETV NINTTILTDQ GRTFEYSQST
TTDSQGRYEF TVPYSTDGPI TGETQFDTAP SGPYVLSYGD TTKEVKVSEE AVLKGEQIKV
|
|---|
| |