| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0242 |
|---|
| Symbol | |
|---|
| ID | 3624855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 285972 |
|---|
| End bp | 288485 |
|---|
| Gene Length | 2514 bp |
|---|
| Protein Length | 837 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637699134 |
|---|
| Product | transmembrane oligosaccharyl transferase |
|---|
| Protein accession | YP_303806 |
|---|
| Protein GI | 73667791 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTC AGGATCATCC TGTATCATCA TTCAAAAATA AAATAAAATC CAGTTGGCCT
TATATTCTGG CAGTTGGAAT AATCGGTTTT GTGTCTCTAT GGATCAGAAT ACTTCCTTCA
GATAGAGTGC TTTTACCTGG CGGAATTGTG AAGTTCACGA CCAATGATGC ATGGTACCAT
ATGCGTACCT TAAGGGTTCT GCTTGAAAAC TACCCCCACA GGATGTTTTT CAATCCCATG
ACCAACTATC CTACTGGGAG TTACATACAT TTTGGTCCAT TGTTCGATCA AATGATGGCT
GTTACTTCAC TGATTCTAGG TCTGGGCCAT CCCAGCTCTC ATCTTGTTGA CACTATAGGA
GCTTATTTCC CTGCCGTGCT CGGTGCCCTA ACTGTTATTC CGGTTTACTA CATAGGAAAA
TATCTTGGAG GCCATAAAAC AGGGATTCTG GCTGCGATCC TGATTGCATT TGCTCCAGGG
CAGTTTCTGT CCCGTTCAAT GATTGGCTTT GCAGACCATC ATGTTGCCGA GTCGCTATTC
AGTACTTTCT TCATGATGTT TTTCATGCTG GCTTTGATTT CAGCAAAGAA AAAAAAGCTG
CGTTTTGAAG ACGTGTTCAA TAAGAAATTC ACTGTCCTGA AAGAACCGTT TATATACTCA
GTTCTGGCGG GAGTCATGTA CTCAGCCTAC CAGCTTTGCT GGCCAGGAGG TTCGCTGTTC
TTATTAATAG TTCTGGTTTA CGCTATATTC CAGTATATCT TGGACAACTT CAGGAATGAG
TCCAGTGACT ACCTTGGGTT TACAGGCATA GTCACCTGTC TGGTAAGTAC AATACTTATC
CTTCCATTTG TCCATCCAGA TATGGGTTTT TCTATGTACT ATTACTCATG GTTCCATGTT
ATCACATCTC TTGGGACAAT GGCAGGTTTT GTAGCTTTGA GTTTCATTGA AAGGGAATTC
AAAAGAAAGC AGATGAAGGC TTATTACTAC CCTCTACTAA TCATAGGAGT TGGAATTCTC
GGGCTTATAT TTATCAAGGT TTTATCTCCA TCACTTTATT CCCTGATTAT GCATGCACCA
AGCACTGTTT TTGGGATTCA ACAGGGAGGA CCTTCAACAA TTCTGGAAGC TTCGTCAATA
TTTTACGATT ATGGCGTTTT TACTCTATCT AAAGTTTATT CAAATTTCAC TACTACGGGA
TTTCTCGCTT CTATTCTAGG AATGCTTATT CTGGCTGCGA ACCTGTTCAG AAAACCAAAG
CCTCAGGAAT TTCTGGTTCT TGTCTGGAGT TTCTTTATTC TCCTCGCAAT TTACGGACAG
AACCGTTTTG CATACTACTA TTCAATAAAC GTTTCAATCT TGAGTGCATA TCTGGGAGGC
CTGTTACTTG AAAAAGTGAA ATGGAGTGAA CTTGACCAGA AGTTCAAAAG TAATGTAAAA
TCGCCTGCAG ATATACCGAA AGCATTGAAA TTCGTCAAAA TAGAGCAGGT TTTTGCAGTC
CTGCTTATAG TGGTATTTCT GATTTATCCA GTATATGGAT CTGCAACGTC ATATACAAAA
ATGGTATACG CTCAGCCCCT TCAGCCCTGG GAAGAAGCTT GTACCTGGCT TAGCTCAAAC
ACTCCGGACC CTGGTATGAA CTACAATACT GTTTATGAAG CCCCGAAAAA TGGAGAACTT
TTCAATTATC CTGATACTGC CTATGGTGTT ATGTCCTGGT GGGATTACGG ACACTACATA
GAGACAATAG GGCACAGGAT GCCAAATGCG AACCCATTCC AGGCTGGAGT GGGAGGACGC
AGGGTAAGCA TTAACGAGAC AAACCAGCCA GGTGCAGCAA CCTTTCTTAC AGCTCCATCG
GAAGAAGAAG CAAGTGCGGT GCTTGAAGCC ATAGACCCAA GGCCTGACAA AGCAGGTGCC
AGATATATAG TGTCTGATGC TAAAATGGCT ACAGGGATAT TCAGCTCAAT TGCTACCTGG
ACCCTTGATA CTGAAGGGTA CTACCAGGCT TACGGGACAG GCAGCATACC ATCTACCCGA
TATTTTAATT CCATGGAAGC AAAACTGCAT ATTTTTGACG GAAACGGCTT GAAACAGTAC
CGTATGGTTC ACGAGACTGA GGCCTACCAA ACTGGTGAGG TAGGGTATAA ATATGTCTAC
AATAACTTAT ACGGAGGCAA ACTTCCTGAA GTAGATACCG GTTATGTAAA AATTTTCGAG
TACGTCAAAG GTGCAAATAT AACAGGCACG GCTTCCCCCA ATGAGACCGT TAATATAAAT
ACGACAATTC TTACGGATCA GGGAAGGACC TTTGAATACT CGCAGTCAAC AACTGCAGAC
TCTCAAGGAA GGTACGAGTT CACAGTGCCT TATTCAACCG ACGGCCCAAT TACAGGAGAA
ACGCAGTTTG ATACTGCACC TTCAGGACCC TATGTATTGA GTTATGGCGA TACGACAAAA
GAAGTAAGAG TAAATGAAGA AGCCGTATTA AAGGGAGAAC AGATAAAAGT CTGA
|
|---|
| Protein sequence | MSSQDHPVSS FKNKIKSSWP YILAVGIIGF VSLWIRILPS DRVLLPGGIV KFTTNDAWYH
MRTLRVLLEN YPHRMFFNPM TNYPTGSYIH FGPLFDQMMA VTSLILGLGH PSSHLVDTIG
AYFPAVLGAL TVIPVYYIGK YLGGHKTGIL AAILIAFAPG QFLSRSMIGF ADHHVAESLF
STFFMMFFML ALISAKKKKL RFEDVFNKKF TVLKEPFIYS VLAGVMYSAY QLCWPGGSLF
LLIVLVYAIF QYILDNFRNE SSDYLGFTGI VTCLVSTILI LPFVHPDMGF SMYYYSWFHV
ITSLGTMAGF VALSFIEREF KRKQMKAYYY PLLIIGVGIL GLIFIKVLSP SLYSLIMHAP
STVFGIQQGG PSTILEASSI FYDYGVFTLS KVYSNFTTTG FLASILGMLI LAANLFRKPK
PQEFLVLVWS FFILLAIYGQ NRFAYYYSIN VSILSAYLGG LLLEKVKWSE LDQKFKSNVK
SPADIPKALK FVKIEQVFAV LLIVVFLIYP VYGSATSYTK MVYAQPLQPW EEACTWLSSN
TPDPGMNYNT VYEAPKNGEL FNYPDTAYGV MSWWDYGHYI ETIGHRMPNA NPFQAGVGGR
RVSINETNQP GAATFLTAPS EEEASAVLEA IDPRPDKAGA RYIVSDAKMA TGIFSSIATW
TLDTEGYYQA YGTGSIPSTR YFNSMEAKLH IFDGNGLKQY RMVHETEAYQ TGEVGYKYVY
NNLYGGKLPE VDTGYVKIFE YVKGANITGT ASPNETVNIN TTILTDQGRT FEYSQSTTAD
SQGRYEFTVP YSTDGPITGE TQFDTAPSGP YVLSYGDTTK EVRVNEEAVL KGEQIKV
|
|---|
| |