Gene Mbar_A0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0237 
Symbol 
ID3626018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp280372 
End bp281376 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content32% 
IMG OID637699129 
Productputative glycosyl transferase 
Protein accessionYP_303801 
Protein GI73667786 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000312549 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATCT CTATTGCTCT TTGCACCTAT AATGGTGCTC AATTTTTACA GGAACAACTT 
GAAAGTATAG CTTTTCAGAC ACGAGTTCCA GATGAAATGA TTGTTTGCGA TGATCTATCA
AAAGACAATA CATTAGAAAT TTTAAAGGAT TTTGCCTCAA AAGTTTCTTT TCCTGTAACT
ATATATATTA ATGAAAAAAA TTTAGGTTCT ACTAAAAATT TTGAAAAAGC TATTGGGTTA
TGCACAGGGG ATATTATTTT TTTATCTGAC CAAGATGATG TCTGGAATCC TGAAAAAGTG
GAGAAAATTG AAAACCAATT TTCTACTTCT CCTTCGACAG CACTTATTTT CACGGATGCA
GAATTAGTAG ACGAAAATTT AAAGCCTTTG GGATATAGTC AGTGGCAATC TAATGGATTT
AATCAAAAAG AGCAAGATTA CTTTATTCAT GGTAAATTTA TTGAAGTATT GCTTAAACGT
AATGTTGTAA CTGGTTCAAC AATGGCGTTT CGTTCGGAAT TTAAAAAATT AATTTTTCCT
ATTCCAGATG CCTGGGTTCA TGATGGATGG ATAGCACTAT TAATTGCTTT TGCGTCCGAT
TTAAATCTTA TATCAGAGCC TCTTATAAAA TACCGTCAAC ATCATCTGCA GCAAGTAGGA
GCTGGTGATG AAGGTTTAAC CATATATCAG AAAATTCACA GAAAGCTCAC TCAGCTAAAA
AATTTGGAGT CTGACTACTC TAATTTTCAG CCAGAATGTA TAAGATATAC ATTGGCCTAT
AAACATTTAG TTAACTCTCG TTTTCCTTCT ATAAAAACAA ATAAAATTCC ACTTCTTAAA
GCTCGAGCTT CCCATTACTG TATACGTTCT CATCTACCTG TTAATAGAAC AAAAAGAATT
CCACTTATTA TAAAAGAACT ATTAAATATG AATTATCACC ACTATTCTGA AGGGATATCC
AGTATTGGCG GGGATTTGCT TCGTAATAAC AGTGAAATTA AGTAA
 
Protein sequence
MKISIALCTY NGAQFLQEQL ESIAFQTRVP DEMIVCDDLS KDNTLEILKD FASKVSFPVT 
IYINEKNLGS TKNFEKAIGL CTGDIIFLSD QDDVWNPEKV EKIENQFSTS PSTALIFTDA
ELVDENLKPL GYSQWQSNGF NQKEQDYFIH GKFIEVLLKR NVVTGSTMAF RSEFKKLIFP
IPDAWVHDGW IALLIAFASD LNLISEPLIK YRQHHLQQVG AGDEGLTIYQ KIHRKLTQLK
NLESDYSNFQ PECIRYTLAY KHLVNSRFPS IKTNKIPLLK ARASHYCIRS HLPVNRTKRI
PLIIKELLNM NYHHYSEGIS SIGGDLLRNN SEIK