Gene Mbar_A0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0236 
Symbol 
ID3626017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp277391 
End bp279742 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content32% 
IMG OID637699128 
Producthypothetical protein 
Protein accessionYP_303800 
Protein GI73667785 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000717832 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.75423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA AAAAAAATAG AAGTTCAGAG TTTGCTTACC TCTGGATGAT AAAAAATAAA 
ATTAAAGAAA CTTACATATC TTTTTTACTG CAAGCTTTAA CTAAATTTCA AGGGTTGATA
AGTAAACAAC TACCTCTAAA TACGAAAAGA AGAGAAATAT ATGATTTTGC TATTTTAAAT
CTCCAGATAC TCAAACGCAG AGGGTTTGAA TTATTTATTC ACCAAGTTAA AAATCAAAAT
TTTAAGAATT ATATCAAATC TTCAGAAATC CCAATTTTTG AATCAAAAAT CAGTAAATCT
GATGGCGGTA TCTCTCTTGT TAAAACTTTG CAGGGAAAGT TCAATTTTCC AGCAAACAAC
CTGAATAAAA TAAATATATT TACAATTAAT TCTCAAAAAG AAAATTTTAA GCTTAAACTG
CAAATAATTA ATGAACAAAA AATGGTAATA AGAGAATCTA TAGTAAAAAG TGTTGAAATT
AAAAATAATG AGTATACTTC ATTCAAATTT AAACCAATAA AAGAAAGCAA AGATAGAATA
TTTAATTTTA GATTGCAATC CATAGGTGAA TCTTCGGCCT CAGTCTCATA CGAAAAAACA
GATGAAACAA AGGAGTTAAC GTTATTTTAT GACGGTAACA ACTTTAATGA CAAAATTGGT
TTTCAGGCGT TTTCAGACCT TGGAGTACAA TATGAATATG ACGTATGGAT GTTAAGAAAT
ACTCTAACCG CCACAAAAAA AGAAAGATGT AGAAAAGAAG CACAAAACTT TGCTTATAAA
CCCAAAATAA GCATAATAAT GCCGGTTTAT AATGTGGACG AAATCTGGCT TGAGAAAGCT
ATTGATTCTG TTATAAATCA AATATATACC AACTGGGAAC TATGTATCGC CGACGATGCC
TCTACAAAAC CTCATATAAA ATCCACTTTA TCTAAATATT CAGAATTAGA TTCCCGCATT
AAAGTAAAGT ACCTGAGTAA CAATCGTGGT ATTTCGGGAG CTTCAAACGA AGCCCTACTT
TTAGCTACTG GTGAATTTAT AGGATTACTT GATAACGATG ATGAATTAAG TGTCGATGCT
CTTTATGAAG TTGTAAAAGT ACTAAACAAA AAATCTGATA TTGATCTTAT ATACAGTGAT
GAAGACAAAA TTGATATGAA AGGAAATAGA TGCAACCCTT TTTTCAAACC TGGTTGGTCC
CCTGATGTAT TATTCTCAGT AAATTATGTT TGTCATTTTG CCGTAATAAG GAAAACAATT
GTAGACGAAG TAGGACGATT CAGAATAGGT TTTGAAGGAA GCCAGGATTA CGATCTATTT
TTAAGAGTTG CAGAAAAAAC AAATCAAGTT GAACATATCC CAAAAATACT ATATCATTGG
CGAATGATTC CGGGCTCAAC TGCATTAAAT ATTTTCTCTA AAGATAAAGC ACAGATTAAC
GGTATCAGGT CATTACAGGA TTACTTATAT AGGAAAAAAA TAGATGGAAA AGCAGCTGCC
ACTATAAATA GAACAAATTA CCAGGTAGAT TACGAGATAA AAGGGTCTCC ACTGGTTTCA
ATTATTATCC ATTTTGATGA TAATGTGCAT GTTAAAAAGT GTATTAACAG CATTATCAAA
AACACAGAAG AGACTAGATA CGAAATATTA CTCATGGTGT CTAAAAAGAA TGAAAAACAA
TTGTCAATTA ATTTTGATCC TTCAAACAAA CAACCTGCCA TAAAAGTCTT AACATATGAT
GAATCCTGGA ATGTGTCTGC TATTAATAAT TTTGCTGCAG AGAAGTCCAG TGGAGATTAT
TTATTATTTA TGAATAGTAG AATAGAAACC ACTAATAGAA ACTGGCTAAT TTCTCTATTG
AAAAACGCAG GAAGAGAAGG TATTGGTTGT GTTTGCCCGA AAATTCTCAA TGTTGATGGT
ACAATTAAAC AGGCAGGAAT CATATTAGGT CTGAACGGTG AAAAATACGA TGTTTTTTCA
GGTAATCCTG AAAACAACTG GACTAACTTT GGTTTGGATA CATGGTCCAG GGATTACCTT
GCAGTCAGCG GAGAATGCTT GATGATAAAC AAAAAAACGT TTTTCCAAGC AGGCGGCTTT
GATGAAAACA AATACTATGG AAATGATATT GATTTATGCT TGAGGGTACA TAAAAAAGGC
TTTCGGAATC TTTGCATAGG AACAGTATCT GTATACCAGC TTGGAATAGG TCTAAGAAAG
GATGAGATTT CACCCACTGA TGTACAGAGA ATTTTAGAAC CTTATAGGAT TTTTCTAGAA
ACAGGAGACC CTTACTATAA TCCAAATTTG AGCTTGAAAG AAAAACTATG CAAGTTAGAA
CTCATGCAGT AG
 
Protein sequence
MDNKKNRSSE FAYLWMIKNK IKETYISFLL QALTKFQGLI SKQLPLNTKR REIYDFAILN 
LQILKRRGFE LFIHQVKNQN FKNYIKSSEI PIFESKISKS DGGISLVKTL QGKFNFPANN
LNKINIFTIN SQKENFKLKL QIINEQKMVI RESIVKSVEI KNNEYTSFKF KPIKESKDRI
FNFRLQSIGE SSASVSYEKT DETKELTLFY DGNNFNDKIG FQAFSDLGVQ YEYDVWMLRN
TLTATKKERC RKEAQNFAYK PKISIIMPVY NVDEIWLEKA IDSVINQIYT NWELCIADDA
STKPHIKSTL SKYSELDSRI KVKYLSNNRG ISGASNEALL LATGEFIGLL DNDDELSVDA
LYEVVKVLNK KSDIDLIYSD EDKIDMKGNR CNPFFKPGWS PDVLFSVNYV CHFAVIRKTI
VDEVGRFRIG FEGSQDYDLF LRVAEKTNQV EHIPKILYHW RMIPGSTALN IFSKDKAQIN
GIRSLQDYLY RKKIDGKAAA TINRTNYQVD YEIKGSPLVS IIIHFDDNVH VKKCINSIIK
NTEETRYEIL LMVSKKNEKQ LSINFDPSNK QPAIKVLTYD ESWNVSAINN FAAEKSSGDY
LLFMNSRIET TNRNWLISLL KNAGREGIGC VCPKILNVDG TIKQAGIILG LNGEKYDVFS
GNPENNWTNF GLDTWSRDYL AVSGECLMIN KKTFFQAGGF DENKYYGNDI DLCLRVHKKG
FRNLCIGTVS VYQLGIGLRK DEISPTDVQR ILEPYRIFLE TGDPYYNPNL SLKEKLCKLE
LMQ