| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0229 |
|---|
| Symbol | |
|---|
| ID | 3626010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 270261 |
|---|
| End bp | 271637 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637699121 |
|---|
| Product | mannose-1-phosphate guanylyltransferase (GDP) |
|---|
| Protein accession | YP_303793 |
|---|
| Protein GI | 73667778 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.265223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.721323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGTA TAAAATCAAT AATTCTTGCA GGCGGTTCAG GAACACGACT CTGGCCTCTC
AGCCGAGAAA TGTATCCCAA GCAGTTTTTG AAGTTTGGAA ATACGTCTCT TTTTCAGGAA
ACCGTCCTCA GATGCCTTGA AATTTCAGAT ATTTCCGAAA TTTTTGTTGT AACGAACGAA
GCTCAAAAAT TTTTCGTAAT CGGCCAGATT GAGGAAATAG GGTATTCACT CCCCACAGAG
AATGTCTTAA TCGAGCCAGA AGGCAAGAAT ACTCTCCCTG CGATCTTCTT CGGAATGAAA
GAAATTGAAA AAAAATATGG GCGCTCTGTA GTAGGAATAT TTTCTTCGGA TCATGTCCTT
GATAGAGTTG CAATGCAGAC AATTGCTTCG GCTGAGGATC TTGCTTCAGA TTATCTGGTT
ACTTTCGGCG TTGTTCCTGT TTTTCCTCAC ACAGGATATG GTTATATTAA ACCCTCAGAA
GCCTGTGTGC CAGGTTACAG GGTTTCGGAA TTCCGAGAAA AACCGGACCG TGAAACTGCA
GAGAAATATA TTAAGGAAGG CTGCCTCTGG AACAGTGGGA TGTTCCTTTT CGATACAGAG
CTTTTCTTTG ACGAAGTTAA AAAATATGCA CCTTCTGTTT TCACATGTTT TGAAAACGGA
AAGGATATTA ATGAGATTTA TGCATGCGTG GACAAGATTT CCATTGACTA TGGAATAATG
GAAAAATCCG AGAGGGTCGC AGTTGTAAAA CTTGAGCAAA AATGGAGCGA TCTGGGAAAT
TTTGCAGCAA TTTATGACGA GTTTGAAAAG GACCCTGTAG GAAATGTAGT CCATGAATGC
GATCCTATAA TGCTGAACTC CGATGGAAAT CTCGTATATT CAAGTTGCGG TAAGCTTGTT
TCGCTCATTG ATATTAAAGA CATGGTTATT GTTGATACCA GTGATGCTCT GTTAGTCTGC
CCTAAATCCA GTAGCCAGAA GGTAAAAGAT ATTGTCTCAG CCCTTAAAGA AAGGAATGAT
GAAAGGGCAT ACATAGGGCA AACCGTTTAC AGGCCCTGGG GCTCGTATAC CTTACTTGAA
GCTTCTCCGG AGCATAAGAT TAAGAATATC ACAGTACTTC CTGACCATAA GTTAAGCCTC
CAGCTGCATT ACCATCGCAG TGAGCACTGG GTGGTTGTTA AAGGTATGGC CTGTGTGGAA
GTGCGCGGAC AGCAGTTTTT CCTGAGACCT GGCGAGAGTA CTTTTATCAG CGCAGGAGAA
AAACACAGAT TGTCCAATCC GGGAAAAATT CCGCTTGAGA TTATTGAAGT GCAGTTAGGG
GAACTTGTAG ACGAAGCGGA CATTGTCAGG TTTGATGATG TTTATGGGAG GAGCTGA
|
|---|
| Protein sequence | MTGIKSIILA GGSGTRLWPL SREMYPKQFL KFGNTSLFQE TVLRCLEISD ISEIFVVTNE
AQKFFVIGQI EEIGYSLPTE NVLIEPEGKN TLPAIFFGMK EIEKKYGRSV VGIFSSDHVL
DRVAMQTIAS AEDLASDYLV TFGVVPVFPH TGYGYIKPSE ACVPGYRVSE FREKPDRETA
EKYIKEGCLW NSGMFLFDTE LFFDEVKKYA PSVFTCFENG KDINEIYACV DKISIDYGIM
EKSERVAVVK LEQKWSDLGN FAAIYDEFEK DPVGNVVHEC DPIMLNSDGN LVYSSCGKLV
SLIDIKDMVI VDTSDALLVC PKSSSQKVKD IVSALKERND ERAYIGQTVY RPWGSYTLLE
ASPEHKIKNI TVLPDHKLSL QLHYHRSEHW VVVKGMACVE VRGQQFFLRP GESTFISAGE
KHRLSNPGKI PLEIIEVQLG ELVDEADIVR FDDVYGRS
|
|---|
| |