Gene Mbar_A0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0225 
Symbol 
ID3626006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp264264 
End bp265067 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content33% 
IMG OID637699117 
Producthypothetical protein 
Protein accessionYP_303789 
Protein GI73667774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.300408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGC AAATGTCTAA GTGGGAAGAG AATGAGCAAG AGCTAGAGGA TTATATTGTA 
AGCGTTTTTG AACGTATGTT AAAAAATGAT AATTTAAAAA ATTTCAAAAT TGAAAAGAAT
CACATCGAAA TTGGACAGGG AGGATTCAAA CATAAATTTG ATATTTTTTA TGAAGTTGAC
GTAGCAGGAG TATCTATTAA AGCTGCAATA GAATGTAAAT ATTACAATAA AAGAATAACA
GAAAAAATGG TCACAGAATT TAAGTCAAAA CTTAACGAAT GCAATAATAT TACTGGTTTT
ATTCTAGCCA CTAAAAGCTA TAATGCAGGA GCTAAGAAGT TTGCGGATTT TAATGGTATA
CAACTGATAA CTGATGATCA GTTACCAAAT ATACCTGAAA TGTTGCTTTT AGCCACGGTC
TGTTCTGTGC CAGACGAAAA TGTACATGGG GATCCATTTT GGACTATTAT GAGAGTAACT
AAAGATGGGA AAAATACAGG TTCATATTAC TCGCTCAATG GTGACGAGTT CAATATGTTA
GAAATTATCG TCCACGAGAG ATACAGGCCA ATATTCTTAT TCATATCAAA AAAGACTGCT
GAGAGAGCAT TAGAAGCCGA TGGGGCAAAG GATTGTGCTG TTTTTGGAGT TAGTCGACAA
CAATTGAAAT GGATTTGTCT CCTGTCACAG TTTTTCAAAT GTGAAATACT AATCAGCAGC
GTTTTGTCAC TTGACTCAAA TGGATGTCTC TTTGCGTTAA AACATTCATA CGATGAAATA
TTAGCTGAAT ATGATTTGGA ATAA
 
Protein sequence
MSKQMSKWEE NEQELEDYIV SVFERMLKND NLKNFKIEKN HIEIGQGGFK HKFDIFYEVD 
VAGVSIKAAI ECKYYNKRIT EKMVTEFKSK LNECNNITGF ILATKSYNAG AKKFADFNGI
QLITDDQLPN IPEMLLLATV CSVPDENVHG DPFWTIMRVT KDGKNTGSYY SLNGDEFNML
EIIVHERYRP IFLFISKKTA ERALEADGAK DCAVFGVSRQ QLKWICLLSQ FFKCEILISS
VLSLDSNGCL FALKHSYDEI LAEYDLE