Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0174 |
Symbol | |
ID | 3624477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 196601 |
End bp | 197509 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637699063 |
Product | hypothetical protein |
Protein accession | YP_303739 |
Protein GI | 73667724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.352016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA AGGACTCAGC AACAAAAAAC CAGAGATATC TGGCTGTTTT TTTGGCATTA ACAATGCTTT TGTCAGCCGG TGCGATCTTC TTTTCAGGTA ACTCAAATAA AAATAATGAG AGTGATGATG TTTCCTCTTC CGGAAATATA GAGGAAAATA ATACGATCGC TTTTTCTCAA ATTCCTGGCA GGCAGGTCCA CCATGAATTC AATTCCGTTG CGGATGGATT AAACATGTCT CCTGAAGGGG TAGTAAGTGC TTCATATGTA GACCTGCAAA GAACGACAGG AACTCCATTT GAACAGGTCT TTGGGAATAA AACAATGATG TACTCTCTAT ATGGGGCAGA CGTAACTAAG CGCTATGGAG CACGTTATGC TGATGGTGAA GGGTTCGAAC TCCACCAGAT CCCGGAGCGG AAAATCTTAA TGCCCTGGGG ATTAGTCCAG TACGATAACT ACAGTCTCCT TGCAAGGACA AACAATACTT ATGACATTTG GAATGTAGTC GGAAGCCCTA TGATCCTTGG CTCTCGCCAG AGCGTGCAAG ATGTAATTGA CGTGCTGGAA GGAAATGCAA CTGCTTCAAC CGAATATAAT AGTCTTCTGA GCCAGGTGAG TCCTGAAGGA AGCCTCTACC AGGAATTGGC CACAAAGACG AATAATTCCA CTATCCAGGC CGATCAGTTA TACATTGATC TCAGGAAATT GGATGACGGC AGTTACAGTC AGACGTCCCT TTACCTTAAT CCCGATCCCG AATTTGCTGA GAAGATTAAG GCTTTCCAGG CAAACTCCAC CGAACGCGGA GTAACCTACA ATGTAACTAC CTCAGGAAAC ATTACCAAAA TGATAATTAC TTCCGACTTT AGAAGCTTAC TTAATGAAAC AGAGATGCTT TCACAGTAA
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Protein sequence | MKQKDSATKN QRYLAVFLAL TMLLSAGAIF FSGNSNKNNE SDDVSSSGNI EENNTIAFSQ IPGRQVHHEF NSVADGLNMS PEGVVSASYV DLQRTTGTPF EQVFGNKTMM YSLYGADVTK RYGARYADGE GFELHQIPER KILMPWGLVQ YDNYSLLART NNTYDIWNVV GSPMILGSRQ SVQDVIDVLE GNATASTEYN SLLSQVSPEG SLYQELATKT NNSTIQADQL YIDLRKLDDG SYSQTSLYLN PDPEFAEKIK AFQANSTERG VTYNVTTSGN ITKMIITSDF RSLLNETEML SQ
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