Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0171 |
Symbol | nifH |
ID | 3624474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 193718 |
End bp | 194539 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637699060 |
Product | nitrogenase reductase |
Protein accession | YP_303736 |
Protein GI | 73667721 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.217628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.670038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAGA TAGCAATCTA CGGAAAAGGT GGAATTGGAA AATCCACTAC TACTCAGAAT CTGACCGCGT CCCTCTCGAC CATGGGCAAC AAAATTATGC TTGTAGGATG TGACCCGAAG GCAGATTCTA CTAGAATGCT GCTTGGTGGC CTGAACCAGA AGACCGTACT TGACACTCTT AGAAGTGAAG GCGATGAAGG AGTTGATCTT GATGTTGTTA TGCAGCGGGG ATTTGGCGAC ATAAAATGTG TGGAATCCGG AGGGCCTGAA CCAGGTGTAG GATGTGCAGG CAGAGGAATT ATCACTTCCA TCGGGCTGCT TGAAAACCTT GGAGCATATA CCGATGATCT TGATTATGTA TTCTACGACG TACTTGGTGA TGTTGTGTGT GGTGGATTTG CTATGCCTAT CCGCGAAGGA AAAGCAAAAG AGATTTACAT AGTTGCCAGT GGAGAACTGA TGGCTATCTA TGCTGCAAAT AACATCTGTA AAGGACTTGC TAAGTTTGCC AAAGGTGGAG CCCGTCTGGG AGGTATCATC TGCAACAGTA GAAATGTCGA CGGAGAGCGT GAACTTCTCG ACGCTTTTGC AAAAAAACTG GGAAGTCAGC TAATTCACTT CATACCCAGG GACAACATTG TTCAGAGAGC AGAAATTAAC AGGAAGACTG TAATTGATTT TGACCCAGAA TCCAACCAGG CAAAAGAGTA CCTGACTCTT GCCCACAACG TCCAGAACAA CGACAAACTT GTTGTCCCAA CTCCGCTTCC AATGGAAGAG TTAGAATCAA TGATGGTTGA ATTCGGAATT GTTGATATGT GA
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Protein sequence | MRQIAIYGKG GIGKSTTTQN LTASLSTMGN KIMLVGCDPK ADSTRMLLGG LNQKTVLDTL RSEGDEGVDL DVVMQRGFGD IKCVESGGPE PGVGCAGRGI ITSIGLLENL GAYTDDLDYV FYDVLGDVVC GGFAMPIREG KAKEIYIVAS GELMAIYAAN NICKGLAKFA KGGARLGGII CNSRNVDGER ELLDAFAKKL GSQLIHFIPR DNIVQRAEIN RKTVIDFDPE SNQAKEYLTL AHNVQNNDKL VVPTPLPMEE LESMMVEFGI VDM
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