| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0171 |
|---|
| Symbol | nifH |
|---|
| ID | 3624474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 193718 |
|---|
| End bp | 194539 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699060 |
|---|
| Product | nitrogenase reductase |
|---|
| Protein accession | YP_303736 |
|---|
| Protein GI | 73667721 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
|---|
| TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.217628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.670038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGA TAGCAATCTA CGGAAAAGGT GGAATTGGAA AATCCACTAC TACTCAGAAT
CTGACCGCGT CCCTCTCGAC CATGGGCAAC AAAATTATGC TTGTAGGATG TGACCCGAAG
GCAGATTCTA CTAGAATGCT GCTTGGTGGC CTGAACCAGA AGACCGTACT TGACACTCTT
AGAAGTGAAG GCGATGAAGG AGTTGATCTT GATGTTGTTA TGCAGCGGGG ATTTGGCGAC
ATAAAATGTG TGGAATCCGG AGGGCCTGAA CCAGGTGTAG GATGTGCAGG CAGAGGAATT
ATCACTTCCA TCGGGCTGCT TGAAAACCTT GGAGCATATA CCGATGATCT TGATTATGTA
TTCTACGACG TACTTGGTGA TGTTGTGTGT GGTGGATTTG CTATGCCTAT CCGCGAAGGA
AAAGCAAAAG AGATTTACAT AGTTGCCAGT GGAGAACTGA TGGCTATCTA TGCTGCAAAT
AACATCTGTA AAGGACTTGC TAAGTTTGCC AAAGGTGGAG CCCGTCTGGG AGGTATCATC
TGCAACAGTA GAAATGTCGA CGGAGAGCGT GAACTTCTCG ACGCTTTTGC AAAAAAACTG
GGAAGTCAGC TAATTCACTT CATACCCAGG GACAACATTG TTCAGAGAGC AGAAATTAAC
AGGAAGACTG TAATTGATTT TGACCCAGAA TCCAACCAGG CAAAAGAGTA CCTGACTCTT
GCCCACAACG TCCAGAACAA CGACAAACTT GTTGTCCCAA CTCCGCTTCC AATGGAAGAG
TTAGAATCAA TGATGGTTGA ATTCGGAATT GTTGATATGT GA
|
|---|
| Protein sequence | MRQIAIYGKG GIGKSTTTQN LTASLSTMGN KIMLVGCDPK ADSTRMLLGG LNQKTVLDTL
RSEGDEGVDL DVVMQRGFGD IKCVESGGPE PGVGCAGRGI ITSIGLLENL GAYTDDLDYV
FYDVLGDVVC GGFAMPIREG KAKEIYIVAS GELMAIYAAN NICKGLAKFA KGGARLGGII
CNSRNVDGER ELLDAFAKKL GSQLIHFIPR DNIVQRAEIN RKTVIDFDPE SNQAKEYLTL
AHNVQNNDKL VVPTPLPMEE LESMMVEFGI VDM
|
|---|
| |