| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0158 |
|---|
| Symbol | |
|---|
| ID | 3626686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 177849 |
|---|
| End bp | 179042 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699047 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_303723 |
|---|
| Protein GI | 73667708 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTG AAGCAGCAGA CACAGTATGG GTACTCATCT CGTCTGCACT TGTATTGTTA
ATGCTTCCCG GACTTGCACT GTTCTATGGC GGGCTTGTCC AGCGTAAAAA CGTTTTGAGC
AGCATGATGC ATTCATTTGT TGCAATGGGC GTCATGGCTC TGGAATGGGT ATTGATAGGT
TACTCACTTG CATTTGCAGA CGGTAACTGG TTTGTAGGTG GCCTTGGACA TGTATTCCTG
AAAGGGATAG ATGTATATTC AGTAACTGGT ACAATTCCGA CTTATGCATA TGTTGCGTTT
CAGGGAATGT TTGCAATAAT TACACCTGCT CTGATTTCAG GTGCAATTGT AGGACGTGTG
AAGTTTAAAT CTTATATCGC ATTCATTGCT CTCTGGGGAC TTATCGTATA TGCACCTGTC
TGCCACTGGG TCTGGGGTGG TGGGTTCCTT ACAGGGGAAG CTCTTGACTT TGCAGGCGGT
ACAGTTGTGC ACATAACCTC AGGTGTCTCC TCACTTGCAA TTCTTACATA CCTTGGAAAG
AGACGTGGTT TTGGGGTAGA TTCATTAAAG CCACATAATG TTACTTTGAC GCTTCTTGGA
ACTGGTCTTC TCTGGTTCGG ATGGTTCGGG TTTAACGCAG GTTCATCACT TGCTGCAAAT
GAGATTGCAT CTCTCGCATT CATTACAACA CTTGTAGCCC CAGCAGCTGC AGGATTTATC
TGGATGGCCC TTGAATGGTA TCACTTAGGG TATCCAACAG CTCTGGGATT TGCAACAGGG
ATTCTTGCAG GACTTGTTGC AATAACTCCA AGTGCAGGCT TTGTCACGCC AATGGCAGCA
ATTCCTATAG GTGCGATCAC AAGTTTCGTG TGCTACAATG CTGTAGGACT CAAAGAAAGG
CTTGGATATG ATGACTCGCT GGATGCCTTT GGAGTACATG GTGTTGGTGG AATAGTAGGC
GCACTCCTAG TAGGTGTATT TGCAAGTGTA GGAGGGACCG GTCTCTTACT TGGGAATTCC
AGCCAAATGT TAATCCAGCT TCAAGGCGTT GTCGTCACAA TTGTTTATGC AGCTGTCGGG
ACTCTCCTTA TTGGATTCAT ACTTAACAGA ACTATAGGGC TTAAAGTCAG CGAAAGTGAA
GAAAACATCG GACTTGACAA GACGCAGCAT GGTGAAGTTG CATATAACAT CTGA
|
|---|
| Protein sequence | MTIEAADTVW VLISSALVLL MLPGLALFYG GLVQRKNVLS SMMHSFVAMG VMALEWVLIG
YSLAFADGNW FVGGLGHVFL KGIDVYSVTG TIPTYAYVAF QGMFAIITPA LISGAIVGRV
KFKSYIAFIA LWGLIVYAPV CHWVWGGGFL TGEALDFAGG TVVHITSGVS SLAILTYLGK
RRGFGVDSLK PHNVTLTLLG TGLLWFGWFG FNAGSSLAAN EIASLAFITT LVAPAAAGFI
WMALEWYHLG YPTALGFATG ILAGLVAITP SAGFVTPMAA IPIGAITSFV CYNAVGLKER
LGYDDSLDAF GVHGVGGIVG ALLVGVFASV GGTGLLLGNS SQMLIQLQGV VVTIVYAAVG
TLLIGFILNR TIGLKVSESE ENIGLDKTQH GEVAYNI
|
|---|
| |