Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0142 |
Symbol | |
ID | 3625830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 161092 |
End bp | 161793 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699031 |
Product | hypothetical protein |
Protein accession | YP_303707 |
Protein GI | 73667692 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.233923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTG CAAAGCCTTT CCAAAATGCC ACTCCTCATC TTCCTGAGGA CTTTGATTCC CGAATTTCCG GAGTTCTCCC TTACTACTCC TGTTTTCATC AGGAAACTAT CAATTTCATC AAGTCCATGC CATCAATCCC AAGAATTTGG CTGGATACCG GATGCGGAAC AGGATCCCTG GTTAATAAAG CAATTGAGGA ATTTCCGACT ACAAAGTTTC TTTTACTTGA TCCCTCAGAA GGCATGCTGA ACCAGGCAAA GAAAAAACTT TCATCCTGCC CTGCTAACCG GCTGGAACTC CTGAAAGCTT CCTCTACTCA GGAATTCTCT CAGGAATTGG AGGAAAAACC AGATATCATC ACTGCGATAC AGTGCCATCA CTATCTTAGC CGCGAAGAAA GGGCCAGGGC CACTGGTATG TGCTATAATC TTCTAAAAGA AGGCGGAGTT TATATTACAT TTGAAAATAT CAGACCGCTA ACAGAAGAAG GAATAATTGT AGGGAAAAGG TACTGGCGCA ATTTCCAGTT AGACCATGGC AGGACTGATA AAGAAATAAA GGAGCATCTG AAGCGTTTTG ATACCGAATA TTTTCCAATA ACTGTTGAAG AACACCTTGA ACTCTTAAGA AAAACAGGAT TTAGAACCGT GGAATTATTC TGGTATTCTT ACATGCAGGC TGGCTTTTAC TGTATAAAAT AA
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Protein sequence | MTSAKPFQNA TPHLPEDFDS RISGVLPYYS CFHQETINFI KSMPSIPRIW LDTGCGTGSL VNKAIEEFPT TKFLLLDPSE GMLNQAKKKL SSCPANRLEL LKASSTQEFS QELEEKPDII TAIQCHHYLS REERARATGM CYNLLKEGGV YITFENIRPL TEEGIIVGKR YWRNFQLDHG RTDKEIKEHL KRFDTEYFPI TVEEHLELLR KTGFRTVELF WYSYMQAGFY CIK
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