Gene Mbar_A0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0142 
Symbol 
ID3625830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp161092 
End bp161793 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content41% 
IMG OID637699031 
Producthypothetical protein 
Protein accessionYP_303707 
Protein GI73667692 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.233923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTG CAAAGCCTTT CCAAAATGCC ACTCCTCATC TTCCTGAGGA CTTTGATTCC 
CGAATTTCCG GAGTTCTCCC TTACTACTCC TGTTTTCATC AGGAAACTAT CAATTTCATC
AAGTCCATGC CATCAATCCC AAGAATTTGG CTGGATACCG GATGCGGAAC AGGATCCCTG
GTTAATAAAG CAATTGAGGA ATTTCCGACT ACAAAGTTTC TTTTACTTGA TCCCTCAGAA
GGCATGCTGA ACCAGGCAAA GAAAAAACTT TCATCCTGCC CTGCTAACCG GCTGGAACTC
CTGAAAGCTT CCTCTACTCA GGAATTCTCT CAGGAATTGG AGGAAAAACC AGATATCATC
ACTGCGATAC AGTGCCATCA CTATCTTAGC CGCGAAGAAA GGGCCAGGGC CACTGGTATG
TGCTATAATC TTCTAAAAGA AGGCGGAGTT TATATTACAT TTGAAAATAT CAGACCGCTA
ACAGAAGAAG GAATAATTGT AGGGAAAAGG TACTGGCGCA ATTTCCAGTT AGACCATGGC
AGGACTGATA AAGAAATAAA GGAGCATCTG AAGCGTTTTG ATACCGAATA TTTTCCAATA
ACTGTTGAAG AACACCTTGA ACTCTTAAGA AAAACAGGAT TTAGAACCGT GGAATTATTC
TGGTATTCTT ACATGCAGGC TGGCTTTTAC TGTATAAAAT AA
 
Protein sequence
MTSAKPFQNA TPHLPEDFDS RISGVLPYYS CFHQETINFI KSMPSIPRIW LDTGCGTGSL 
VNKAIEEFPT TKFLLLDPSE GMLNQAKKKL SSCPANRLEL LKASSTQEFS QELEEKPDII
TAIQCHHYLS REERARATGM CYNLLKEGGV YITFENIRPL TEEGIIVGKR YWRNFQLDHG
RTDKEIKEHL KRFDTEYFPI TVEEHLELLR KTGFRTVELF WYSYMQAGFY CIK