Gene Mbar_A0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0141 
Symbol 
ID3625829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp158554 
End bp160488 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content48% 
IMG OID637699030 
Producthydantoinase 
Protein accessionYP_303706 
Protein GI73667691 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.456007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTACA GTCTTGGGAT TGATGCTGGA GGTACTTATA CCGATGCAGC GCTTGTAAGG 
GATTCGGACG GAGAGATTGT AGATTCAAAT AAAGCGCTTA CTACCTACCC CGACCCCATT
ACAGGCATTA AAAACGTAAT TGATGGGCTC AATCCTGAAT ATCTTGAAAA CGTAAAGCTG
GTTTCGGTCT CAACGACCCT TTCCACCAAT ACCATCCTTG AAGGCACAGG TTTTCCTGTA
GCCCTTATCC TTATAGGTGA CCATCCGGTT GATAAAGAGT TACCAGCCGA ACATGTGCTT
TTTGCTGCTG GCGGGCACAA CCATAATGGG GAGGAGGTCA CTGCCCTTGA TACTAAGGCT
ATCGAGGAAT TTGCTTTGCA GGTCAAGGAT AAGGTTTCAG CTTTTGCGAT ATCGTCTTAC
TTTAGCACAA GAAATCCTGA ACACGAAATA AGGGCCAGAG ACCTGGTTCT TGAACTTACA
GGGCTGCCTG CGGTTTGCGG CCACGAGCTT TCCCAGGAAC TGGGAGCTTA CGAAAGGGCT
GTGACGGCTT TTCTCAATGC CCAGCTCATC CCTATTACAA GACAGTTCGT GAAGTCCGTT
ATTTCAGATA TCACGAAACG CGGGATTAAC GCACGGCTCC TTATGCTCAA ATGCGATGGC
TCGGTAGTGG GGATAAGAGA CGCCCTGAAA AAACCCATTG AAACTATCTT TTCAGGCCCT
GCAGCAAGCC TTGTAGGAGC ATCCCATCTT TCAGGGCTCA AGACCTGTGA GGTTGTGGAT
GTAGGAGGCA CGAGCACGGA CATCTCCTCA ATCTGTATGG GTGTTCCAGA CCTTAGCGAT
GAAGGGGCTG TCGTAGGCGG CTGGAAGACC CGCGTCCGGG CAATCAGGAT GGAGACAACA
GCTACAGGAG GGGATAGCCA TATCTGGACC GTTAACAAGG AACTTTTCCT TGGGCCCAGG
CGAGTCATCC CCCTGGCAGT AGCTGCAGTA AAATACCCGA GCTTTTTGAA TAACCTCAAA
AGAACGCCCG TACCTTTCAG AGAAGATCTG GGAGAGAACA TCCAGCCCAC AAAATTTTTT
GTAAGATCCG GTTATCAGGT TGGAGAATTA AGCAGGACTG AAGCTGAGGT AATGAAGGTC
ATTGGGGAAG AACCCGTTTC GGTACCTGAA ATCAATGTCC TTCTCCGAAA AGACGTCTAT
CCTCAGACAT TAGATTCTCT TATCAGAAAA CGCCTTATTC AGGCAGTTGG TTTCACTCCT
ACTGACGCTC TGCATGTACT TGGGGAATAC ACAGAATGGG ATGTCGAAGC TTCACAAATA
GGCGCAGAAA GGCTTGCGAG GCTCATGCAT ATGATCCCAG GAGAGTTCTG CACTGCCGTA
AAAAAGCGGG TTGCAAGGAG TATGGCACTT CATCTGCTGT CTTATATCTT TTCAGACGTT
CCATATGCAT CCATTGAGAA GATCCTTGAC GGAAACTATC CTGCTAAATT TAAGCTGGAC
ATTCCGGTTG TGCTGCTTGG AGGTCCTGTC CGGGCGTATA GGGAAGATCT GAAGGCAATC
ATTGATGCAG AAATCCTCGT TCCTCCACAT GCCGAGGTAG GAAACGCGGT CGGAGCCCTT
GTGGGAAAAG GCATTAAAAG AGTTGAAATT ATGATACGGC CAGCAAGCCT CATGTCCCCA
GATAAAGATT TCCTGGTCTT TGCTCCGGGC AGCAGGCTGA AATTTGATAC GTATTCGGAA
GCCCTTGATA CTGCAACCAA ACTTGGGAAA AAGCTTGCTA TGGATTACAT GCGCGACTGC
GGCCTTAGCG GAAACCAGGT TGAAATTTCC GTTGAGAAAA AAACGATTTC ACCTGATGGC
TGGAACTATC CACCTATGGA AACTAATTTA CTGGTAATGG GAATAGGCAT ACGTGGGTTA
CATATTAAGG AATAA
 
Protein sequence
MHYSLGIDAG GTYTDAALVR DSDGEIVDSN KALTTYPDPI TGIKNVIDGL NPEYLENVKL 
VSVSTTLSTN TILEGTGFPV ALILIGDHPV DKELPAEHVL FAAGGHNHNG EEVTALDTKA
IEEFALQVKD KVSAFAISSY FSTRNPEHEI RARDLVLELT GLPAVCGHEL SQELGAYERA
VTAFLNAQLI PITRQFVKSV ISDITKRGIN ARLLMLKCDG SVVGIRDALK KPIETIFSGP
AASLVGASHL SGLKTCEVVD VGGTSTDISS ICMGVPDLSD EGAVVGGWKT RVRAIRMETT
ATGGDSHIWT VNKELFLGPR RVIPLAVAAV KYPSFLNNLK RTPVPFREDL GENIQPTKFF
VRSGYQVGEL SRTEAEVMKV IGEEPVSVPE INVLLRKDVY PQTLDSLIRK RLIQAVGFTP
TDALHVLGEY TEWDVEASQI GAERLARLMH MIPGEFCTAV KKRVARSMAL HLLSYIFSDV
PYASIEKILD GNYPAKFKLD IPVVLLGGPV RAYREDLKAI IDAEILVPPH AEVGNAVGAL
VGKGIKRVEI MIRPASLMSP DKDFLVFAPG SRLKFDTYSE ALDTATKLGK KLAMDYMRDC
GLSGNQVEIS VEKKTISPDG WNYPPMETNL LVMGIGIRGL HIKE