Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0137 |
Symbol | |
ID | 3625825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 155079 |
End bp | 155774 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637699026 |
Product | succinoglycan biosynthesis regulator |
Protein accession | YP_303702 |
Protein GI | 73667687 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.425411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.944723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGCTA TAACCCTCCT GAGCAGCGGG CTTGATTCAG TTGCAGCGCT CGCAATCGCA GCGGAAGATT TTGACATTGA AATGGCTATT ACCTTTGATT ATGGGCAGAG AGCCAGAGAG AGGGAAATTG AGTACTCACG AAAGGTATGC GAATATTTCG GAATTGAGCA CAGGGTTATA AAACTGGACT GGCTTTCGGA AATAACATCC ACCTCTCTCG TTAACAGGGA TGTTGAAGTC CCATCTTTAT CGTTTGAGGA CATTGGCGAA GCGGCCCCTG CAGAAATCAC AGACGCTTCA GCAAAAGCTG TCTGGGTCCC TAACAGAAAT GGGGTGATGC TCAATATAGC AGGAAGCTTT GCCGAAAGCA GGGAATGTGA GTATCTCGTA GTGGGTTTTA ACGGGGAAGA GGCAGGCACT TTCCCTGACA ATTCCCTTGA CTACGTGAAG GCAATGGACA GGGCTTTTTT CTATTCCACT CAAAACGGGG TAAAAATACT GGCTCCTCTG ATTGAACTTG GGAAAACGGA AATAGTCAGA AGGGCTCTGG AAGCAAAAGC TCCTCTTGAG TACAGCTGGA GCTGCTATCG CGGAGAAGAA ATTCCCTGCG GAGAATGCGA AAGCTGCGTG CGCAGGGCAC GTGCGTTTAA AAACGCAGGT GTAAAAGATC CTCTTCTGGA AAGACTTGGA ATTTGA
|
Protein sequence | MKAITLLSSG LDSVAALAIA AEDFDIEMAI TFDYGQRARE REIEYSRKVC EYFGIEHRVI KLDWLSEITS TSLVNRDVEV PSLSFEDIGE AAPAEITDAS AKAVWVPNRN GVMLNIAGSF AESRECEYLV VGFNGEEAGT FPDNSLDYVK AMDRAFFYST QNGVKILAPL IELGKTEIVR RALEAKAPLE YSWSCYRGEE IPCGECESCV RRARAFKNAG VKDPLLERLG I
|
| |