Gene Mbar_A0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0134 
Symbol 
ID3625822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp153141 
End bp153494 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content40% 
IMG OID637699023 
Product6-pyruvoyltetrahydropterin synthase 
Protein accessionYP_303699 
Protein GI73667684 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA TGAGATTGGG AGTTATTGAC TATATTGATA GTGCCCATTA CCTTCCTGGA 
CATGGAAAAT GTGGAAGAGT ACACGGTCAC ACTTATAAAA TTGAGGTCTT GGTAGAAGGG
GAAGTCAGGG AAAATGGAAT GGTTATCGAC TTTTACGATC TGAAGAAAGG AATTAAAGAA
ACTCTTGAAG AATATGACCA TATCCTATTA AATGAAATCC TTGAATTTCC AAGTTCCGAA
CATCTCTGCC AGCACATTCA CTCCCGACTC TACAAGAGAT TTGGCTTTCC CCTTCAGGTA
AGGGTCTGGG AAGGGGAAGG CAAATGGTGT GAAATGGATA ATTTCTCGGA ATGA
 
Protein sequence
MTKMRLGVID YIDSAHYLPG HGKCGRVHGH TYKIEVLVEG EVRENGMVID FYDLKKGIKE 
TLEEYDHILL NEILEFPSSE HLCQHIHSRL YKRFGFPLQV RVWEGEGKWC EMDNFSE