Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0134 |
Symbol | |
ID | 3625822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 153141 |
End bp | 153494 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637699023 |
Product | 6-pyruvoyltetrahydropterin synthase |
Protein accession | YP_303699 |
Protein GI | 73667684 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein [TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAA TGAGATTGGG AGTTATTGAC TATATTGATA GTGCCCATTA CCTTCCTGGA CATGGAAAAT GTGGAAGAGT ACACGGTCAC ACTTATAAAA TTGAGGTCTT GGTAGAAGGG GAAGTCAGGG AAAATGGAAT GGTTATCGAC TTTTACGATC TGAAGAAAGG AATTAAAGAA ACTCTTGAAG AATATGACCA TATCCTATTA AATGAAATCC TTGAATTTCC AAGTTCCGAA CATCTCTGCC AGCACATTCA CTCCCGACTC TACAAGAGAT TTGGCTTTCC CCTTCAGGTA AGGGTCTGGG AAGGGGAAGG CAAATGGTGT GAAATGGATA ATTTCTCGGA ATGA
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Protein sequence | MTKMRLGVID YIDSAHYLPG HGKCGRVHGH TYKIEVLVEG EVRENGMVID FYDLKKGIKE TLEEYDHILL NEILEFPSSE HLCQHIHSRL YKRFGFPLQV RVWEGEGKWC EMDNFSE
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