Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0118 |
Symbol | |
ID | 3625920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 131284 |
End bp | 132171 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637699007 |
Product | hypothetical protein |
Protein accession | YP_303684 |
Protein GI | 73667669 |
COG category | [R] General function prediction only |
COG ID | [COG2404] Predicted phosphohydrolase (DHH superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.183607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATG ATAAACGCAT GATTTTAATT TATCACCATG ATGATAATGA CGGATACTGT GCAGCTGCTA TTGCTGGTGC TTCCTATGAT CGGAATGAAT TTGACATAAA ATTTGTTGCT ATAAATTATG GCAAAGAGTC TTGGAGTGAG GGCGAAATAA AGGCAGCAGA AAAAGTATGG CTTCTTGATT TTACAAGCGA TAATATGGAG GAATTCGTAA AAGTTTGTGG TCCTAAGTTG ATATGGGTGG ACCATCACAA GACCGCTGTG GAGAAATTTC CAGACCTGTG GAATTCCAAC AGTATTCCGG GAATCCGGTC TGTTGAAAAA GCAGCATGTA TACTTACATG GGAGTTCACA CATCCAGAAA ATATTTTACC TCCTGCTGCA GTTGCCTATA TCGGGGATAA AGATCTGTGG AAGTTTGAAT ACTCTGAAAC CAGGGCTTTC ACTGCAGGCT TTAATCTTAT AGTGAAAACT CCTGATGATC CAGCATGGGA CGTACTCCTT GGTTCGGAAT ACGAGGATAC TGTAAATAAT ATGATATCTA TCGGGGAATT GCTTCTCAAA GCTCAAAACT ACAAGCTCCA AAAAGCCTTT GACCGTGGGG TGGATTACAT TTTCCATAAC TGGAAAGCCA GGCTTGTAAA CACTACTGGA AATATCTCCG AGCTTGGAGA ATTTATCTAC AGGAAGCCTG AATATGATAT TGCTATCATG TGGCAGGCTG TAGAGGATAT GGTGGTATTC AGCTTGAGAT CCGATTCAGG GAATCCCAAT TCGCCCGATT GCGCCGAAAT CGCTCAACAA TACGGCGGTG GAGGGCACAA GAATGCCGCT GGATTCCAGA GAAAAAATAT GGATTTTCCA CGCCTGCTTT TCAAATGA
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Protein sequence | MTDDKRMILI YHHDDNDGYC AAAIAGASYD RNEFDIKFVA INYGKESWSE GEIKAAEKVW LLDFTSDNME EFVKVCGPKL IWVDHHKTAV EKFPDLWNSN SIPGIRSVEK AACILTWEFT HPENILPPAA VAYIGDKDLW KFEYSETRAF TAGFNLIVKT PDDPAWDVLL GSEYEDTVNN MISIGELLLK AQNYKLQKAF DRGVDYIFHN WKARLVNTTG NISELGEFIY RKPEYDIAIM WQAVEDMVVF SLRSDSGNPN SPDCAEIAQQ YGGGGHKNAA GFQRKNMDFP RLLFK
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