| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0104 |
|---|
| Symbol | rps3p |
|---|
| ID | 3626226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 113249 |
|---|
| End bp | 114184 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637698994 |
|---|
| Product | 30S ribosomal protein S3P |
|---|
| Protein accession | YP_303671 |
|---|
| Protein GI | 73667656 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.190261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAG AGAGAAAATT CGTAAATGAT GGGTTTGTCA AAGCCTCCAT GGACGAGTAT
TTCGCAGAAC AGCTGAACAG AGCTGGATAT GGCGGTATGG AGCTTAACAG GACCCCAATG
GGCACCCAAA TTGTTATCTA TTCTGAAAAA CCTGGAATGG TAATCGGGAA AGCCGGGAAG
GTCATCAGAA AGCTTACCAG GGACGTTGCA GCCAGGTACA ATCTTGAAAA CCCGCAGATT
GATGCTCAGG AAGTTAAGAA ACCTGAACTT AATGCTCAGA TGATGGCATC AAGGCTTGCA
GCTTCAATTG AGAGAGGCTG GTATTTCAGG AAAGCCGGAC ACAACACCCT TCGTGCAGTC
ATGAATGCAG GTGCACTTGG CTGTGAAGTT GTTATCTCCG GGAAACTTAC GGGTGCCAGG
TCGAGAGTTG AAAAATTCGT TGATGGGTAC ATAAAACACT CCGGAAACCC TGTAGACGAG
GTTGTTGACG AAGGGTTTGC AGTAGCAATC AAAAAGCTTG GAACCCTTGG CTGCAAAGTC
AGGATCATTC AGCCAGGCGT TGTCCTGCCT GACTCATACA CTACTACGGA ACCAAGTGAG
CCTGTAACTG AACCGGTTGA AAAGCCTGCG GAAAAGCCGG CTGCGAAACC GGCTGAAAAA
CCTGTTGAGG CCCCTAAAAA GGAAAGCGCG GCAAAACCCA AAACTCCTGC AGTAGCACCT
GAAAAACCAG TAGAAACAGC TGAAGTCGCA GAGCCTGAAG AAGCCGAGGA AGAACCACAG
GCTGAAGTAG CAGAAGACCT TGAAGAGGCT GAAGTCATCC AGGTTGAAGG CTCAGAAGAA
TTGCGAAGAC AGGTCAATGG AGTCTGGCAG CACAAGCACG AAGGTTACGA CTACTGGCAT
CCCATGGCAC GGGTTCACAA GGAGGCTAAG GAATAA
|
|---|
| Protein sequence | MAIERKFVND GFVKASMDEY FAEQLNRAGY GGMELNRTPM GTQIVIYSEK PGMVIGKAGK
VIRKLTRDVA ARYNLENPQI DAQEVKKPEL NAQMMASRLA ASIERGWYFR KAGHNTLRAV
MNAGALGCEV VISGKLTGAR SRVEKFVDGY IKHSGNPVDE VVDEGFAVAI KKLGTLGCKV
RIIQPGVVLP DSYTTTEPSE PVTEPVEKPA EKPAAKPAEK PVEAPKKESA AKPKTPAVAP
EKPVETAEVA EPEEAEEEPQ AEVAEDLEEA EVIQVEGSEE LRRQVNGVWQ HKHEGYDYWH
PMARVHKEAK E
|
|---|
| |