| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0101 |
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| Symbol | rps17p |
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| ID | 3626223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 112390 |
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| End bp | 112719 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637698991 |
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| Product | 30S ribosomal protein S17P |
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| Protein accession | YP_303668 |
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| Protein GI | 73667653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03630] archaeal ribosomal protein S17P |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.269064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAG ATATTGGATT AAACATACCG GCGCCATCAG AAGAATGTAA TGATTCATAC
TGTCCCTTCC ACGGAACACT TTCAGTAAGA GGTCAAATCC TTGTAGGTAC CGTGGTCAGC
AGCAAGATGG ACAATACGGT AGTTATTGAA AGGCAATACA TGAAATTGGT GCCGAAATAC
CAGAGATACG AGAAGAGACG TTCAAAGGTG CACGCACACA ACCCGCCTTG CATTTCAGCA
AAAGTCGGGG ATATCGTTAC GATCGCAGAA TGCAGGCGTA TAAGCAAAAC GAAGTCCTAT
GTGGTAGTTA AAGCGGAGGT ACCCAAATGA
|
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| Protein sequence | MARDIGLNIP APSEECNDSY CPFHGTLSVR GQILVGTVVS SKMDNTVVIE RQYMKLVPKY
QRYEKRRSKV HAHNPPCISA KVGDIVTIAE CRRISKTKSY VVVKAEVPK
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