| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0087 |
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| Symbol | |
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| ID | 3627582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 104707 |
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| End bp | 106185 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637698977 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_303654 |
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| Protein GI | 73667639 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.023527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTCA GGGATACGTT AGAACCGTTT TTTAACAAGT TACCTGCAGT AGCAAGTCCG
GAAAAACACG TCCATTTTAA GGATAAGCTC TGGTGGACTC TGGGAGTCCT TTTGCTGTAC
TTTGCTCTGG CAAATGTACC GCTTTTTGGG ATGTCCCAGG ACTCGGTTGA CCTTTTTGAA
TCTTACCGTG CCTTCTTTGC AGGTGCGTCT GGATCTCTAA TTCTCCTAGG TATCGGGCCT
ATTGTCACGG CTTCGATTGT CCTGCAACTT CTTGTTGGAG CAGATATCAT TAAATTGGAC
CTGTCAGATC CCAAAGATCA GTCATTCTTC CAGGGAGCTC AGAAGTTCCT TGTGTTTGTC
ATGATCATAC TGGAAGCTCT GCCGCAGCTA CTTGGTGGAT ATATCCAGCC GGATCCAGGG
CTCGCTTCTT CTCTAGGTGT AGGCCTGGGA GTAATCACCT TCCTGCTTCT TATCCAGATC
TTTATTGGAG GCGCACTGAT CCTTTTCATG GATGAAGTGG TTTCCAAATG GGGCATCGGG
TCAGGAGTCG GGCTTTTTAT TGTTGCGGGA ATCTCTCAGC AGATTGTTAC AGGAATCTTT
AACTGGCAGC TTGATTCTTC CGGGCTCCCG GTCGGGCTGA TTCCAAAATG GATTTACATC
GCCCAGAACG TTGGAGCAGA TTACCTTCTT TCAGGTGAGG GCGTGTTGTA TATGCTGGTC
AGTGGAGGTA TTCTTGCGCT TCTAAGCACG ATTGTTATTT TCTTGCTTGT GGTGTACGTG
GAAAGTACAA GAATCGAAAT TCCTCTCGCC CACAGTGCGG TTAGAGGAGC AAGGGGCCGT
TTTCCTGTCA AGTTAATATA CGCATCAGTC TTGCCGATGA TCCTTGTCAG AGCTCTTCAG
GCGAATATCC AGATGATTGG AATTATTCTT GCCAGCCGTG GAATCACTTT CTTTGGAGAG
TTCCATGGGT CTACGCCGCT AAACGGGATT ATGTATTACC TTGCTCCAAT ACACAGTCCT
TATGATTGGA TTCCATCTCT TGTAAGACAG TCCTTTTCAG GTTATGGGGC GGCTACACCT
GCAAACTGGC AGATTGTACT TCATGTCTTT ACAGATGCTA CTATGCTTGT CGTAGGCGGA
ATTATCTTTG CACTCTTTTG GATAGAAACA ACGGGTATGG GAGCTAAACC TACTGCACAG
AAGATTTTCA ATTCCGGCAT GCAGATTCCA GGTTTCAGGC GAAATATTAG CAGTATTGAA
AAAGTTACCC AGCGTTATAT CCCGAAAGTC ACCGTAATAG GTGGGGCTTT CATAGGGCTG
CTGACGCTGA TTGCAAGCTT GCTCGGTACT CTTGGAAGTA CTAGTGGTAC AGGGCTTTTG
CTGGCTGTCA GTATCGTATA TCGTCTCTAT GAGGACATAG CTTCCGAGCA GATGATGGAA
ATGCATCCGA TGATCCGCTC CTTCTTTGGG GAACAGTAA
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| Protein sequence | MTLRDTLEPF FNKLPAVASP EKHVHFKDKL WWTLGVLLLY FALANVPLFG MSQDSVDLFE
SYRAFFAGAS GSLILLGIGP IVTASIVLQL LVGADIIKLD LSDPKDQSFF QGAQKFLVFV
MIILEALPQL LGGYIQPDPG LASSLGVGLG VITFLLLIQI FIGGALILFM DEVVSKWGIG
SGVGLFIVAG ISQQIVTGIF NWQLDSSGLP VGLIPKWIYI AQNVGADYLL SGEGVLYMLV
SGGILALLST IVIFLLVVYV ESTRIEIPLA HSAVRGARGR FPVKLIYASV LPMILVRALQ
ANIQMIGIIL ASRGITFFGE FHGSTPLNGI MYYLAPIHSP YDWIPSLVRQ SFSGYGAATP
ANWQIVLHVF TDATMLVVGG IIFALFWIET TGMGAKPTAQ KIFNSGMQIP GFRRNISSIE
KVTQRYIPKV TVIGGAFIGL LTLIASLLGT LGSTSGTGLL LAVSIVYRLY EDIASEQMME
MHPMIRSFFG EQ
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