Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0084 |
Symbol | |
ID | 3627579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 102205 |
End bp | 102825 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637698974 |
Product | integral membrane protein |
Protein accession | YP_303651 |
Protein GI | 73667636 |
COG category | [S] Function unknown |
COG ID | [COG1422] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0420165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGTTTCGG AGACATTAAA AACTCAAATA GACCGGTTCC TGCTGGCTCT CGGTTTTTCC CTTATGATTG GGATTATGAT TCTCGGGCAG AGTTTCAGGG AGGCTGTCGG GGAAGTAGTA GGGACTTTAA TGAATCCCGT ACTTGCTCTG GTCGGGCAGG AGAATTTCTA TCTAATCCTT TTGGTAATGG CATCTATTAC TGCTATTTAC GCATCCCTTA TCCAGAAATA CACAATTGAC TGGGACCTCA TGAGGAATAC CCAGGAACGC ATGAAGGTTT TCCAGAAGGA ATTCCGGGAG GCACAGCTTT CTCAGAACAC TTATATGCTT AAAAAACTGG AAGAACAACG CCAAACAATG ATGGAAGACC AGATGAAGAT GTCCAAGCAG CAGTTCAAGC CTATGGCTTA CATCAGTATT ATTTCGGTTC CTCTCTTCAT GTGGGCTTAT TATTACATCA GTGGGCACGG AAGCGCCACG ATGGTTTTTC CTTTCTGGGG TGAACAGTTG TTGACAACCC ATGCTTTTTG GTACTTCCAG AACTGGTTAT ACTGGTACTT TATTTGTTCT CTTGGAGTTA GCCAGTTTAT CAGAAAGGCA CTGGATATCG GTGGGGTCTG A
|
Protein sequence | MVSETLKTQI DRFLLALGFS LMIGIMILGQ SFREAVGEVV GTLMNPVLAL VGQENFYLIL LVMASITAIY ASLIQKYTID WDLMRNTQER MKVFQKEFRE AQLSQNTYML KKLEEQRQTM MEDQMKMSKQ QFKPMAYISI ISVPLFMWAY YYISGHGSAT MVFPFWGEQL LTTHAFWYFQ NWLYWYFICS LGVSQFIRKA LDIGGV
|
| |