Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0081 |
Symbol | |
ID | 3627575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 98630 |
End bp | 99337 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637698970 |
Product | gliding motility protein |
Protein accession | YP_303648 |
Protein GI | 73667633 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.450143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA TCCTGAACGA TATCGTAAAA AGTTTTGACA AAAAGGAGGT TTTGCGGGGT GCGAGTTTTG CCTTTGAAAA GGGGGAAATT TACGGACTCC TCGGAAGAAA CGGCTCAGGC AAAACCACGC TGTTTAACTG CATCAATGAG GATTTGAGGA TTGACGGCGG TTCAATTCTC CTTGAAGAAA ATGGAGTGCA GAGAGAAATT TGTCCTGATG ATATCGGATA TGTTCTGTCG ACGCCAGTAG TTCCGGAGTT CTTGACAGGC AGAGAGTTTT TAAAGTTCTT TCTTGACATA AACGTGAAAA AAATTCCGGA CATTAAGCCT ATTGACGAAT ATTTCGATTT TGTAAAGATC GAAAGCGAGG ATCGCGACAG GCTTTTGAAA GATTATTCCC ATGGCATGAA GAGCAAGATG CAGATGCTTA TAAGCTTCAT CGCAAATCCA TCCATTCTGC TTTTAGACGA GCCGCTGACC TCATTTGACG TTGTGGTCGC TGACGAAATG AAGACGCTGC TGCGCCAAAT CAAAAAAGAC CACATTATTA TTTTTTCTAC TCATATCATG GAGCTTGCTC TGGATTTATG TGACGAGATC GTGATTCTGA GCGGCGGGGT TCTGGAAAAA ATGGAAAAGG ATGACCTCAG CAACGGGGCC TTTAAGGATA AGATCCTTCA GGCCCTAAGG AGGGATGAGA ATGATTGA
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Protein sequence | MKLILNDIVK SFDKKEVLRG ASFAFEKGEI YGLLGRNGSG KTTLFNCINE DLRIDGGSIL LEENGVQREI CPDDIGYVLS TPVVPEFLTG REFLKFFLDI NVKKIPDIKP IDEYFDFVKI ESEDRDRLLK DYSHGMKSKM QMLISFIANP SILLLDEPLT SFDVVVADEM KTLLRQIKKD HIIIFSTHIM ELALDLCDEI VILSGGVLEK MEKDDLSNGA FKDKILQALR RDEND
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