Gene Mbar_A0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0081 
Symbol 
ID3627575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp98630 
End bp99337 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content43% 
IMG OID637698970 
Productgliding motility protein 
Protein accessionYP_303648 
Protein GI73667633 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.450143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA TCCTGAACGA TATCGTAAAA AGTTTTGACA AAAAGGAGGT TTTGCGGGGT 
GCGAGTTTTG CCTTTGAAAA GGGGGAAATT TACGGACTCC TCGGAAGAAA CGGCTCAGGC
AAAACCACGC TGTTTAACTG CATCAATGAG GATTTGAGGA TTGACGGCGG TTCAATTCTC
CTTGAAGAAA ATGGAGTGCA GAGAGAAATT TGTCCTGATG ATATCGGATA TGTTCTGTCG
ACGCCAGTAG TTCCGGAGTT CTTGACAGGC AGAGAGTTTT TAAAGTTCTT TCTTGACATA
AACGTGAAAA AAATTCCGGA CATTAAGCCT ATTGACGAAT ATTTCGATTT TGTAAAGATC
GAAAGCGAGG ATCGCGACAG GCTTTTGAAA GATTATTCCC ATGGCATGAA GAGCAAGATG
CAGATGCTTA TAAGCTTCAT CGCAAATCCA TCCATTCTGC TTTTAGACGA GCCGCTGACC
TCATTTGACG TTGTGGTCGC TGACGAAATG AAGACGCTGC TGCGCCAAAT CAAAAAAGAC
CACATTATTA TTTTTTCTAC TCATATCATG GAGCTTGCTC TGGATTTATG TGACGAGATC
GTGATTCTGA GCGGCGGGGT TCTGGAAAAA ATGGAAAAGG ATGACCTCAG CAACGGGGCC
TTTAAGGATA AGATCCTTCA GGCCCTAAGG AGGGATGAGA ATGATTGA
 
Protein sequence
MKLILNDIVK SFDKKEVLRG ASFAFEKGEI YGLLGRNGSG KTTLFNCINE DLRIDGGSIL 
LEENGVQREI CPDDIGYVLS TPVVPEFLTG REFLKFFLDI NVKKIPDIKP IDEYFDFVKI
ESEDRDRLLK DYSHGMKSKM QMLISFIANP SILLLDEPLT SFDVVVADEM KTLLRQIKKD
HIIIFSTHIM ELALDLCDEI VILSGGVLEK MEKDDLSNGA FKDKILQALR RDEND