Gene Mbar_A0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0080 
Symbol 
ID3627574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp97069 
End bp98637 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content42% 
IMG OID637698969 
Producthypothetical protein 
Protein accessionYP_303647 
Protein GI73667632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAG CTTTCATTAA GTCCTTCAGG CTGAAAAACA CATATAAAGC CAATGGCATC 
ATCTATTCGC TCAAATCCAT CCCTGTCATC AACAGGCTGC TACCGGTCTC GCTCTATCGA
AGCCCGGGGA TGAAAATATT TGCCAATTTC GTCAGCATCC TGTGGGAGAT CGGCTCGATG
TTTTTGGGCA AGCTGCTCTA TCTGTTTATT ATTATCTTTC TTCTAAAAGA TCATATGAAA
AGCAGTCCTG CGAACAGCTT CATGCATATG TTTTTCTTTC TTACTATTAC GGGCGGTTTC
CTCAACACAC ATATATTTCA TCCCACCAGA GACAAGTATT ATGCCATTTT TCTCATGCGA
ATGAACGCGC GGGAGTATAC GCTTTCAAAT TACTTCTATT TCCTTTTGAA AATCGCTGTC
GGATTTTTGC CTTTCACGCT GCTTCTTGGA CGGCTTTCAG GGGTGCCTAC CGTTATCTGT
CTTGTGATGC CGCTTTTTGT CGTTTCCGTA AAACTTATTT TTACTGCCCT CGCGCTTCAT
GAGTATGTCC GAACCGGCCA TGCAAAAAAT GAAAATAAGT TCGATCCGGT TGTTCTGATT
GGCATTGCTG TATCAGTGGC TGCGGCATAT CTCCCACCGT TTCTCGGCTA TGCCATGAAC
GGAGCTGTTT TTCTCGCTCT GTTTGTCATT TCCGCTGTTA TGGCTGTGTT TTCCTTCTTA
TATGTGTTCA AATTCCCTGA ATACCGAAGG ATTTGCAAGG AACTTCTCAC AGCGGATAGT
TTTGCTATGA ACAGAAAAGA TATGGCTACA CGTGCTACTC AAAAATCTTT GCAAAAGAAT
ATAGACCTTA AGGCAACAAG CAGCAAAAAC GGCTATCAGT ATTTCAACGA CCTTTTTGTC
AAGCGTCACA GCAGTCTGCT GACCAAATCA GCCAAAAATA TCACTTTGAT TTCCCTTGCA
GTGCTTGCGT TTTCCATTAC GGCCTGTTTT CTTATCCCTG AGGTAAAACC GAACATAAAC
GGGATGATGC TGACCTTTTT GCCTTATTTT TTGTTCATCA TGTATTTTAT TAATCGCGGA
AAGGTTATTA CTCAGGCCAT GTTCATGAAC TGTGACCACA GTATGCTTGC CTACCGGTTT
TACAGACAAC CGCGTGCAAT TCTGCTTCTT TTTACGGAAC GGCTGAAATC CATTCTATTG
ATAAACTTGA TGCCCGCTTC GGTAATTGCA CTCGGGCTGC CGTTTCTGTT ATGGCTTACA
GGCGGGACGA ATAACGCGCT CAATTATGTG CTGCTGTTTG TTTCCATTAT AGCAATGTCG
GTATTTTTTT CGGTGCACAA CATGGTGCTA TATTATCTTT TGCAGCCTTA CAATATCAAT
CTCGAAATAA AAAGTGGCAC TTTTGCCGTT GCCAATTCAT TTACTTATAT CGTTTGTTAT
TTAGCCATCG GTAAGAAAGT CCCTACTCTG ATTTTCGGCA CATCGATTTC AGTATTTTGC
ATTGTATATA TTGCCGTCGC CTTGATTCTT GCATACAGGC TTGCACCAAA GACATTTAAG
CTGCGTTAA
 
Protein sequence
MIEAFIKSFR LKNTYKANGI IYSLKSIPVI NRLLPVSLYR SPGMKIFANF VSILWEIGSM 
FLGKLLYLFI IIFLLKDHMK SSPANSFMHM FFFLTITGGF LNTHIFHPTR DKYYAIFLMR
MNAREYTLSN YFYFLLKIAV GFLPFTLLLG RLSGVPTVIC LVMPLFVVSV KLIFTALALH
EYVRTGHAKN ENKFDPVVLI GIAVSVAAAY LPPFLGYAMN GAVFLALFVI SAVMAVFSFL
YVFKFPEYRR ICKELLTADS FAMNRKDMAT RATQKSLQKN IDLKATSSKN GYQYFNDLFV
KRHSSLLTKS AKNITLISLA VLAFSITACF LIPEVKPNIN GMMLTFLPYF LFIMYFINRG
KVITQAMFMN CDHSMLAYRF YRQPRAILLL FTERLKSILL INLMPASVIA LGLPFLLWLT
GGTNNALNYV LLFVSIIAMS VFFSVHNMVL YYLLQPYNIN LEIKSGTFAV ANSFTYIVCY
LAIGKKVPTL IFGTSISVFC IVYIAVALIL AYRLAPKTFK LR