Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0060 |
Symbol | |
ID | 3626991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 73851 |
End bp | 74516 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637698950 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_303630 |
Protein GI | 73667615 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA AAAGCTGTAT GATTCTCGCC CTTGATGTTT CCGACAGGGA AGAAGCGCTT AAAATTGCAG AAGACGTTTC GGAATTCGTG GACGCTATAA AGGTAGGCTA TCCTCTAATA CTTGCTACCG GACTTGGAAT TATCAGGGAG CTTGCCGAGT TTGCTCCTAT AATAGCCGAT TTCAAAGTTG CCGATATTCC AAATACCAAC CGCCTTATCT GTGAGCATGT CTTTGAGGCA GGAACCGATG CAGTAATTGT TCAGGGTTTT ACAGGCCGGG ACAGCCTTGA TGCCTGCATT GAGATTGCTT CCGAATACGG AAAAGATGTG TTCGTGGTAA GTGAAATGAG CCACCCAGGA GGAGCTGAAT TCCTCCAGCC TGTCGGAGAA GCAATCGCAA GAATGGCAGC CGAAGCAGGG GCTTTTGGCC TTGTTGCACC CGCGACCAGA CCGGAAAGAG TGACAACGAT TAGAAAAATT ATCGGTAACA AACTTACCAT CATCTCGCCT GGAGTCGGCG CTCAGGGAGG AAAAGCGTCT GATGTTATTG CCGCAGGCGC AGACTGGGTA ATTGTAGGAA GAGCCATTTA CAAAGCAGAG TCACCAAGAG AAGCTGCCCG CAAGATTGCT GCTGAGATTG AGGCTGAATT CGAGCAAGAA AACTGA
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Protein sequence | MEKKSCMILA LDVSDREEAL KIAEDVSEFV DAIKVGYPLI LATGLGIIRE LAEFAPIIAD FKVADIPNTN RLICEHVFEA GTDAVIVQGF TGRDSLDACI EIASEYGKDV FVVSEMSHPG GAEFLQPVGE AIARMAAEAG AFGLVAPATR PERVTTIRKI IGNKLTIISP GVGAQGGKAS DVIAAGADWV IVGRAIYKAE SPREAARKIA AEIEAEFEQE N
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