Gene Mbar_A0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0053 
Symbol 
ID3625525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp62118 
End bp63209 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content35% 
IMG OID637698943 
Producthypothetical protein 
Protein accessionYP_303623 
Protein GI73667608 
COG category[S] Function unknown 
COG ID[COG1817] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000218534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.134625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAATAA TGATTGATAT GGGACACCCT GCACACGTTC ATCTTTTCAA GAATGTCATA 
TGGAAACTTA ATAAAAAAGG CCATCGTGTT TTGGTCACAG CTAGAAATAA GGAAGTTACC
ATAGATTTGC TCAAGGCATA TAATTTTGAA TATGTCTCAG TAGGTGAAAT TGGGAGTAGT
AAAGTTGATT TGGTACGTGA ATGGATAAAT AGAGATTATG AAATACTGAA AATTGCAAGT
AAGTTTAACC CAGATATTCT AATGGGGATG TCAAATCCAT GTGTAGCGCA TGCGTCTTGG
ATTCTCAGAA AAAAAGCTAT ATTGCTGGAT GATTCGGAGG TTACTGCGTT TAGTCATAAA
ATAACATATC CATTTGCAAA TGTAATTTGT ACTCCATCTC TTTACAAAAA GGATCTTGGC
AAAAAACAAG TTAGGTACGA CGGTTATCAT GAATTGGCAT ACCTTCACCC AAATTATTTT
ACCCCTGATC CATCTGTGTT AGAATCTTTT GGGTTCAAAG AAAGTGATAA ATATGTAATT
TTAAGGTTTG TGTCTTGGGG TGCCAATCAC GATATTGGAA ATAAGGGTTT GAGTCTGGAG
GATAAAAGAA AAGTTGTGCA TGAGATTGAA AAATACGGGA AAGTACTTAT TACTTCGGAA
AAGCCATTGC CAGATGATTT GGAAAAATAC AGAATTTCGA CAGCACCGGA GAGAATGCAT
GATCTATTGT TTTATGCTCA GATGTTTTTT GGTGATAGCC AAACAATGAC AACTGAAGCT
GCAATTCTCG GTACTCCAGC CATAAGATGC AATTCATTTG TTGGTGAAAA CGATATGTCA
AATTTCAAAG AACTTGAAAA TAAATACGGA CTGATTTTTA ACTTCAATGA TCCTGAAAAA
GCTTTGAAAA AGGCAGTTGA ATTGCTTCAT AAACCTGGCA TAAAGGAAGA ATGGTTTAGT
AAAAAGGAAC GGTTATTGAA GGACAAAATT GATGTTACTG GATTTCTAGC ATGGTTTATA
GAAAATTACC CTCAGAGCTT TAATGTAATG AAAGATAATC CAGATTTTCA ATATCAATTT
AAAATGGTGT AA
 
Protein sequence
MRIMIDMGHP AHVHLFKNVI WKLNKKGHRV LVTARNKEVT IDLLKAYNFE YVSVGEIGSS 
KVDLVREWIN RDYEILKIAS KFNPDILMGM SNPCVAHASW ILRKKAILLD DSEVTAFSHK
ITYPFANVIC TPSLYKKDLG KKQVRYDGYH ELAYLHPNYF TPDPSVLESF GFKESDKYVI
LRFVSWGANH DIGNKGLSLE DKRKVVHEIE KYGKVLITSE KPLPDDLEKY RISTAPERMH
DLLFYAQMFF GDSQTMTTEA AILGTPAIRC NSFVGENDMS NFKELENKYG LIFNFNDPEK
ALKKAVELLH KPGIKEEWFS KKERLLKDKI DVTGFLAWFI ENYPQSFNVM KDNPDFQYQF
KMV