Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0050 |
Symbol | |
ID | 3625522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 58755 |
End bp | 59837 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637698940 |
Product | glycosyl transferase |
Protein accession | YP_303620 |
Protein GI | 73667605 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000688339 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0134291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGAG TGTTTATGTG TGGTCCAATA TCATCATCAG GAGGAGTCTC AACACACACA AAGTATATAA CGAAATGTTT ATCTAAATTA GGAGTAAAGG TTACTCTCTA TAACTTCATT TCAGAAAATA AATATTTATT TAAAAGTATA TCTTTAGATA AATTTTATCG ACGCACGATT GGTCTCTTTT ATACTTCAGT TAGTCACAGA AAAGAATATG ATGTACTTCA TGTTCAAGCT TCTGGAGGTA TCTTCAGTTT CATTTCCTCT ATAACAGCAT CTATTGTGTC AAAGATTACA AACAAAAAGT TAGTTGTAAC CTTTCATCAC TCAAAGACGG AAGAATTTGT AAAAAAATAT AAATCTTTGT TTAATTTTGT ACTAAGAAAT ACTAATGTTA TGGTTTTAGT TTCAAATAAA CAAAAGGACT TCATTTCTAA AATGTTCCCA AAAGATTCCC ATAAATTAAT TGTGATTCCA AACGGCTATG ATTCAACTTT ATTTTTTCCT CGTGATGCTA ATGAGTGTAG AAAAGTTTTA AACATACCTA TAAATAAAAA AGTAGTATTT AATGTTTCGA ATTTAGTTGA AATAAAAGGT CATAGATATC TTATAGAAGC AATAGGTGAT ATTGTTAAGA AGAGATCGGA TATTTATTGT ATTATTGGAG GAAGAGGTTA TTTAAAAGAA GAGTTAGAAC AGCAAATAAG AGAGTCTAAA CTAGAGAACT ATGTAAAACT AGTTGGCTGG ATCCGAGACG AAGATGTTCC TATTTATATA AACGCTAGTG ATTTATTTGT CCTTCCTAGT TTGGGTGAAG GAAATCCTAT TGTCATGTTT GAAGCAATAG GTTGTGGAAG ACAATTTATT GGAACGAAAG TAGGTGGTAT CCCAGAGGTT ATAACGTCTG AAGATTATGG CCTTTTGGTT GAGCCTGGTA ATTCGCAAGC ACTAGCTGAG AAAATAGAAA GTGCTCTATA TAATAACGAA AAAAATAAAA AAAATATCAA AAATGTAGAG CAGTATCGGT GGGACAATGT TGCAGAACAA ACAAAACAAA TTTATTGCAA ATTAGAATTG TGA
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Protein sequence | MIRVFMCGPI SSSGGVSTHT KYITKCLSKL GVKVTLYNFI SENKYLFKSI SLDKFYRRTI GLFYTSVSHR KEYDVLHVQA SGGIFSFISS ITASIVSKIT NKKLVVTFHH SKTEEFVKKY KSLFNFVLRN TNVMVLVSNK QKDFISKMFP KDSHKLIVIP NGYDSTLFFP RDANECRKVL NIPINKKVVF NVSNLVEIKG HRYLIEAIGD IVKKRSDIYC IIGGRGYLKE ELEQQIRESK LENYVKLVGW IRDEDVPIYI NASDLFVLPS LGEGNPIVMF EAIGCGRQFI GTKVGGIPEV ITSEDYGLLV EPGNSQALAE KIESALYNNE KNKKNIKNVE QYRWDNVAEQ TKQIYCKLEL
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