Gene Mbar_A0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0046 
Symbol 
ID3625518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp54551 
End bp55108 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content32% 
IMG OID637698937 
Producthypothetical protein 
Protein accessionYP_303617 
Protein GI73667602 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000164559 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0456795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAA AAATTCCTTT TAAGATATTA CGTTTAGCAA CTGCTTATGT AAGGATAAGG 
GTAAAAAATA TTATTCTCAA ATTGAAACTT GTTTTTGGAA AAAATGTGTT CATAGGAAGT
AATGTTGTTA TAGATCCTGG ATACCATTGG TTAATTTCTA TTGGTAATAA TTCTGCTATT
ACTAACGGTG TGACTATACT ATCTCATGAT GGCAGTCTTA GCAGACATAC TGGGTATACA
AAAATAGGGA AAGTATCGAT TGGTTCTAAT ACTTTTATCG GTGTCAAAAG TATCATTTTA
CCAGGCGTCA GTATAGGTAA TAATGTTATT ATTGGGGCGG GGAGTGTTGT TACAAAAGAC
ATACCAGACA ATTCAGTTGC TATAGGGAAT CCAGCAGTAG TAGTGGGGTC TATTAAGGAT
TATATTAATA AACATAAAAG AATGATAAGA ACATCTGAAG TCTATGAATG TCAATCCTTA
CTAAAAGATA ATATCAGAGA TTTTAAGGGA GAGATTGGCT ACGTTAAGAC AAATTTTGAA
AATCATGAGG ACCTATAA
 
Protein sequence
MFLKIPFKIL RLATAYVRIR VKNIILKLKL VFGKNVFIGS NVVIDPGYHW LISIGNNSAI 
TNGVTILSHD GSLSRHTGYT KIGKVSIGSN TFIGVKSIIL PGVSIGNNVI IGAGSVVTKD
IPDNSVAIGN PAVVVGSIKD YINKHKRMIR TSEVYECQSL LKDNIRDFKG EIGYVKTNFE
NHEDL