| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0040 |
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| Symbol | |
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| ID | 3625512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 49408 |
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| End bp | 50715 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637698931 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_303611 |
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| Protein GI | 73667596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000125854 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0319641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTCA TTAATAAACT AATAAATGCA AGGCAATATA TTCTAAGTTA CAGATCCAAT
AAAACAATAA GAGATGTACA GTGGTCATTT TTAAGCCTTG TAACATCATC TCTTGCTCAT
CTTTTATTAA GAATGGTACT TGGTAAAGAA TTAGGTCCAA AAGGGCTTGG GACCTATACA
TTGGTATTTA CAATTTATAT TTTTGGAATG CAGTTCGCCG CTTTTGGCTT TGGAGCGGCG
TTGACAAACT CTGTTGCAAA ATATAAAAAT AATATATCTA AAACAAAAGA TTATATTTCT
TCTGGTGTTA TAGGTTCTAT AGTTAGTGGC TCAATAATGG GCATAATATT ATACTCATCT
TCTGAGTTTA TATCTGTAAA TTTTTTTCAT ATTCCTGAAA TGGTAACATT GTTAAAAATA
ACAACAGTCT GTTTCCCATT TATAGCAATT CAAAAAGTCA CATTAGGTAC ATTGAATGGA
TTCAGAAAGA TGGATCATTT TGCAGCGATA AATATTCTCC AAAACACATT CGTCTTTCTA
GTATCAATTT TCTTTGTGTT TTTCTTGAAT ATGGGAATTA CAGGAGCAGT AATTGGTTTT
GTAGTTCCTA CAGTGATGAT AGGAGTTTTA TCTCTGTTAT ATATCAGAAG ATCATTTTCT
TTGCCTTCCA GAATAGTATT AGTTAACATC TTGAGAGAAA TTACATGGTT CGGATTTTAT
GTGGTGCTTG GAAATTCCAT TAACATGATT AACACACAAA TTGGCAGTTT ACTTATAGGT
CGTTTCATGA GTGAAACCGA TGTAGGGTAC TATGCTACAG CAGTAATTAT AATACAAGGT
ATGACATTAA TTCCAAGCGC CATCAACACA GTAGCAACAC CAGCAATAGC TACACATCAT
GAGAAAAAAG AGCACTCAAA AATCAAAAAA TTAGTTAAAA ATACAATGAT AAAAATTTTT
TTGATTGAAA TAATATTTTT AATTTTATTA ACTGTGTTTG GAAAATATAT CATTCTCATA
CTATTCTCAG AAGAATTTAT ACCGGCATAT ACACCGATGT TAATATTATC CATTGGATAC
CTGATATATG CACCATGGAT GTCTGTTGGC TCAATATTTG CAAGCATTGG AAAAGTAAAT
TTATCGTTTA AACTTAATGG CCTTTGTGCT ATACTAAACA CAACATTAAA CTTTTTATTG
ATTCCAAAGT TTGGACTAAT AGGCGCTGCA AGCTCTACAA CTTTCTCGTT AATATTTACT
TTTATACTAA ACTTATGTTT TATAATAAAA TATATAAATA TAAAATAA
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| Protein sequence | MFFINKLINA RQYILSYRSN KTIRDVQWSF LSLVTSSLAH LLLRMVLGKE LGPKGLGTYT
LVFTIYIFGM QFAAFGFGAA LTNSVAKYKN NISKTKDYIS SGVIGSIVSG SIMGIILYSS
SEFISVNFFH IPEMVTLLKI TTVCFPFIAI QKVTLGTLNG FRKMDHFAAI NILQNTFVFL
VSIFFVFFLN MGITGAVIGF VVPTVMIGVL SLLYIRRSFS LPSRIVLVNI LREITWFGFY
VVLGNSINMI NTQIGSLLIG RFMSETDVGY YATAVIIIQG MTLIPSAINT VATPAIATHH
EKKEHSKIKK LVKNTMIKIF LIEIIFLILL TVFGKYIILI LFSEEFIPAY TPMLILSIGY
LIYAPWMSVG SIFASIGKVN LSFKLNGLCA ILNTTLNFLL IPKFGLIGAA SSTTFSLIFT
FILNLCFIIK YINIK
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