Gene Mbar_A0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0037 
Symbol 
ID3627296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp44947 
End bp45408 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content39% 
IMG OID637698928 
ProductGDP-fucose synthetase 
Protein accessionYP_303608 
Protein GI73667593 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.147777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0266748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAAC TGCCGACCTG CCTATATAGA CCTAATGATA ATTTTGATCT TGAGACTTCC 
CATGTGATGC CCGCATTAAT AAGGACGTTC CATGAAGTGA AGGTGAATGA CAAACCTGAA
GTTGTTGTGT GGGGTACAGG CAAGCCTCTC AGGGAATTCA TGCATGTGAA TGATATGGCT
GATACATGTG TGTTTTTGAT GGAAAATTAT GATTTTTCGG AGGTAGGAGA GTTTGTAAAT
ATAGGGGTTG GAGAGGATGT TACAATCAGT GAACTTGTGG AATTAATAAA AGAGATTGTA
GGGTTTGAAG GAAAGATTAA TTATGATACT TCAAAGCCTG ATGGAACTCC AAGGAAGTTG
ATGGATGTGT CTAAGTTGAA TGGATTGGGA TGGAAAGCCA GGATGTCATT GAAAGATGGA
ATTAAAGAAA CTTATGGGTG GTATCAAGAT CAAATCAAGT GA
 
Protein sequence
MEKLPTCLYR PNDNFDLETS HVMPALIRTF HEVKVNDKPE VVVWGTGKPL REFMHVNDMA 
DTCVFLMENY DFSEVGEFVN IGVGEDVTIS ELVELIKEIV GFEGKINYDT SKPDGTPRKL
MDVSKLNGLG WKARMSLKDG IKETYGWYQD QIK