Gene Mbar_A0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0030 
Symbol 
ID3627289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp36999 
End bp37709 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content37% 
IMG OID637698921 
Producthypothetical protein 
Protein accessionYP_303601 
Protein GI73667586 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0213318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00700368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACGTGTG CAAATTGTGC AACTGATGTG ATTTATATGG CTGAGAGACA AAACGAAAGA 
GACGACCGTC AAAAGTTAAA AAATATTAGC TTTGCTAAGA AAATCTTGCT AGGTCTTTCA
ATGTATGTTC CCTCATCTAC ATTCAAAAAA ATAGTGTTGA AATTGCTGGG TGCACATATC
GGCAAAAATG TATACTTTGG TCCTGGATCT CTTGTTCTTT CCAATGATTA CAGTAGTGTT
TATATTGAAA ACAATGTTTT TGTGGCTCCA GGTGTGTTAA TAAATGTAAA TAATTTTACA
GTCGGGGAAA ATTCACATCT TGGGTATCAG TGTTTAATGG TAGGGGAGTC CCTCAAGATC
GGATCCAGAT GCAATATCAG CAACCGAACA TTTATAGAAT GTTCCTATTC TCCAATACTC
ATTGAAGATG ATGTAACTAT TGGTGGATGT GCTATGGTTT CAACTCATGA TGGCTCTTAC
AGGCAGGTTT ATGGTCTTGA AATGAAAGCT GCTCCTATCT ATATTAGATC AAAAGCTTTT
ATTGGCAACA ATGCTATCAT TTTGCCTGGA ATTGAAATCG GTAGAAAAGT TATTGTTGGA
GCGGGTGCTG TCGTAACAAA AAATGCGGTG GCAAATTCAG TAATATGTGG AGTCCCTGCT
GACAAAATTA GAACTATGGA GGTTTCAAAT GAAAATATTA CAGGTAACTA A
 
Protein sequence
MTCANCATDV IYMAERQNER DDRQKLKNIS FAKKILLGLS MYVPSSTFKK IVLKLLGAHI 
GKNVYFGPGS LVLSNDYSSV YIENNVFVAP GVLINVNNFT VGENSHLGYQ CLMVGESLKI
GSRCNISNRT FIECSYSPIL IEDDVTIGGC AMVSTHDGSY RQVYGLEMKA APIYIRSKAF
IGNNAIILPG IEIGRKVIVG AGAVVTKNAV ANSVICGVPA DKIRTMEVSN ENITGN