Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0029 |
Symbol | |
ID | 3627288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 35843 |
End bp | 37021 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637698920 |
Product | glycosyltransferase |
Protein accession | YP_303600 |
Protein GI | 73667585 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000827208 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00854387 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAT TACAGGTAAC TAATTTTTTC AAACCCTCTT GGGAAGCAGG TGGAATTGCA AGGGTTGCCT ATGAAATTTC AAAAAATTTA GTACAACAGG GCCATGAAGT AACAGTTTTT ACTACCGATG GATTTAAATC GAGGCTGAAA ACTATTAAGA ACAAGCCTGT TAATGTAGAT GGAATAAATA CCTATTATTT CCGAAATCTG TCTAATTATT TAACAAAACG CAATATTGTC ATCCCTTATT ATTTACCTTT TATCGCTAGA ATAAAAATTC AGGATTTTGA TGTTATCCAT ATTCATGAGC ATCGGACATT GCTTGCAGTA ATCGTTCATT ATTATTCAAA AAAGTATAAT ATTCCATATG TGTTACAAGC TCATGGAACA CTTCCAAACA CTATTGGTAA ACAGAATCTA AAAAAGATAT TTGATGTTTT ATGGGGAAAT AAAATATTAA AGGATGCATC TAAGCTGATT TCAGTATCCA ATACAGAAGT TGATCAATAT TTACAAATGA ATGTCCCTAT TGAAAAAATG GTCATTATTC CAAATGGTAT AGATGTTGAT TCATTATCTA GCTTACCTGA AAAAGGTAGT TTTAGAGCTA GGTACCATAT TAATCAAAAG CATGCGATAT TGTATTTAGG AAGGTTACAT AAAATAAAAG GTGTTGATTT TCTACTCCGG TCTTTTGTAG AGTTGGTTAA AGATATCGAC GATTCTGTAT TGATATTAGC TGGTCCGGAT GACGGTTATA AAGATAAAGC GAAAGAACAA ATACGTGAGT TTGGTTTAGA AAAAAAGGTT ATTTTTACTG GATATATGGG ACCAATGGAT AAAATTTCAG CTTATTTGGA TGCTGATATC TTAGTTTATC CCTCTTCTTT CGAAATATTC GGGCTTGTTC CATTTGAGGC AATAATGTCT GGCACTCCTG TAATAGTTAC TGATGACTGT GGGTGTAGCG AATTTATAAA AAGAGCTTCT TGTGGGTACT TAGTTAAATA TGGGGATGTA ACTGATTTTA AATGCAAAAT GAGACTAATG CTTGAAAATC CTGAAATTGG GAACAAATTT GTTGAGAATG GGCAAAAATA TATTACAAAT AATTTAACTT GGCCACTAAT TTGTAAAAAA ATGGAGACCC TTTATGAGAA TTGTATTTAC AAAGTTTGA
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Protein sequence | MKILQVTNFF KPSWEAGGIA RVAYEISKNL VQQGHEVTVF TTDGFKSRLK TIKNKPVNVD GINTYYFRNL SNYLTKRNIV IPYYLPFIAR IKIQDFDVIH IHEHRTLLAV IVHYYSKKYN IPYVLQAHGT LPNTIGKQNL KKIFDVLWGN KILKDASKLI SVSNTEVDQY LQMNVPIEKM VIIPNGIDVD SLSSLPEKGS FRARYHINQK HAILYLGRLH KIKGVDFLLR SFVELVKDID DSVLILAGPD DGYKDKAKEQ IREFGLEKKV IFTGYMGPMD KISAYLDADI LVYPSSFEIF GLVPFEAIMS GTPVIVTDDC GCSEFIKRAS CGYLVKYGDV TDFKCKMRLM LENPEIGNKF VENGQKYITN NLTWPLICKK METLYENCIY KV
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