| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0028 |
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| Symbol | |
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| ID | 3627287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 34516 |
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| End bp | 35637 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637698919 |
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| Product | LPS glycosyltransferase |
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| Protein accession | YP_303599 |
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| Protein GI | 73667584 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000218534 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00835571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTAATTA AAAGAAAAAG CATTTGTGTG ATCACTTTTC CACCCATGAA AGCAGGGTTC
ACTCCATTAT CTAATCTTAT TGATATTTTA ACATCTTCTT CTAATGAGAT ATATCTAATT
ACTGGAAACG AAAGTTATCA TCATTTTGCT GGTAATAAAC ATATTCATTT GTATGGTATA
TTCCATTCAA AAGGTAATGG TTCAGTTAAT AGAATTAAAA ATTATATTTG TACCCATTTA
AAAATAGCTC ATTTGTTCCT AAAAATAATT CGTAAAGTCG ATGTATGTAT TTTTTTCTTA
GGAGGGGAAA TGCAAATTTT ATCGTTGATC CCCGCAAAAT TATTTAAAAT AAAAACAGTT
ACTATAGTTT CGGGAGTTTC AATAAAATAC GAGAAAGATA TTCTATCGAA AATAGTTACA
AAATTATGTA CTGTAAACTT TAATCTGGTA GACAAGATTA TATTATATTC TCCACGTCTC
ATAAACGAAT GGAATTTTGA AAAATATTCC AATAAGATTT TGATAGCTCC TCGGCATTTT
TTGGATTTTT CTAATTTTAA TTTAAGCGTT GAGTTTAGTC AAAGGAGCGA TTTCATTGGG
TATGTAGGTC GTTTATCTGA AGAAAAAGGT ATTATTAATT TTATAGAGTC AATTCCTATC
ATTTTAAAAC AAAAACCGTA TCTGAATATT TTGATAATAG GTGATGGAGA TTTAAAAAGT
AATGTTGATA AGTATCTTTC TCAAAATGGT CTTGAAAACA ATGTAAAACT TGTTGGATGG
AGCTTTCGTG AGGATCTTCC CAAATATTTA AATTCATTAA AATTGCTAGT TATTCCTTCG
TATACAGAAG GTCTTCCTAA TGTTATGTTA GAAGCAATGG CTTGCGGAAC GCCTGTACTT
GCTACAGGAG TGGGAGCAAT TCCTGATATA ATAAATGATG AAGAAACTGG CTTTATTATG
GAAAACAATT CTCCTGAATG CATTGCAAAA AATGTTTTCC GTGCTATGAA ACATCCAAAT
CTTGAACATG TTGTAGAGAA CTCTCATAGT TTTGTAAATG ATAACTTCAC TTACAATAAA
GCTGTGGAAA GATATTCAGA AATACTTCAT AATATTCAAT GA
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| Protein sequence | MVIKRKSICV ITFPPMKAGF TPLSNLIDIL TSSSNEIYLI TGNESYHHFA GNKHIHLYGI
FHSKGNGSVN RIKNYICTHL KIAHLFLKII RKVDVCIFFL GGEMQILSLI PAKLFKIKTV
TIVSGVSIKY EKDILSKIVT KLCTVNFNLV DKIILYSPRL INEWNFEKYS NKILIAPRHF
LDFSNFNLSV EFSQRSDFIG YVGRLSEEKG IINFIESIPI ILKQKPYLNI LIIGDGDLKS
NVDKYLSQNG LENNVKLVGW SFREDLPKYL NSLKLLVIPS YTEGLPNVML EAMACGTPVL
ATGVGAIPDI INDEETGFIM ENNSPECIAK NVFRAMKHPN LEHVVENSHS FVNDNFTYNK
AVERYSEILH NIQ
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