Gene Mbar_A0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0027 
Symbol 
ID3627286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp32530 
End bp34323 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content28% 
IMG OID637698918 
Producthypothetical protein 
Protein accessionYP_303598 
Protein GI73667583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000139812 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00503722 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTTCTCCA AGGATAAGTG TATTAATACT TCTAGATACA TAAAATTAGT ATCAATATTT 
GGGTTTATAA TAATATTATC AGCTTTAACT ATTATAACTA ACAGCCATTC TCCTAATGTA
TATGCTTTTT CAATATACAA TATGTATCCA TGGTATTTTT GGGCTCTTAT TGTTATGGCT
ATTTTCATCG GCCAGATGAT ATTAATCTAT AACGCAATTT CTAAGTATGA GACTAATACT
TGGCTAATTG GTTTTTTAAT GATAATAGTT TCAAACCTAA TTTTATTGCT TATGCCAATT
ATCCGAGGAT ATTTCATACA TGGCAGGGAA GATGCTTTAA CTCATATTGG TTATATGGTC
GATATTGAGA ATACCCATAG TATTGGTTTT AACTCTTATC CCATGCTTCA CATACTGGGT
TTTACACTAA AATCCTTCTC TGGTTTAAGT TATAACGATA TTACTATGTT TCTACCTTTA
TTATATTCAC TATTCTATAT ATTTTCGTGG TATATTCTTG GAAAGTATAT ATTTAAAAAC
AAACGTGATC TATTTATAAT GTTATCATTT TCTTCAATAC TATTACTTGG CAGTAAAAAT
GTTATGCTTA GCCCTAATGG GCAAGCAATT CTTTTTGTCC CTTTCTTTCT TTATGTTTTT
TTTAAATCGA GATTACCAAA GAAAGCTGTG CCATATTCGA TTCTGTTAAT TCTACTTAGT
TTTTTTATAA TATTTTCTCA TCCTTTAGTC ACAATTTTGC TTACAGTAAC GATTTTATTA
TCTGATTTTA CTATGTATCT TAATCGTAAC AAAAACTCTG AGTTTAAAAT AAAAAAGTCA
ACTAATTTAT TATTTATTAT GATATGTTCC TTTCTCATAT GGTCTTCATA TTTACATATT
CTTGCATACA GTCTGGAAAA TATAATATCT ACGTTAATAT TCAGTGACGG AGGAGGCTCT
GAATTTGGGA GATACCAGAC ATCTCTTAGT TCTGTTGATG TATCTTTTTT GAAAATCTTC
GGACTAATAC TAAATCTGTA CGGTCCCTAT ATCATATTAT CCATACTCTC TGCCGCCTGT
ATAATATACA TGCTTACTTT TTGGAAAAAA GATAACATAG AAGTAAATTA TTACCATAAA
CTTTCAATTC TAGGATGGGC ATTCCTTGTG ATCTTCTCAC TGCTACTATT TCTCTTCAAT
GATCAATTTG GTTTTATAAG AGTTTATAGT TATTCAATAT TTTTCTCTAT TATCTTGATA
TCTTTTTCAA TAAGTATGTT TCTAAGAAGA TCTTCGGATA AAAATAATAG TAATTTGAAA
GTATTAGTAA TATTTTCAAT TTTGATACTT ATTACGAGTT TATCCACATA TAGTTTATTT
TTGTCACCTA ATATTTTAAA AATAGATCAA CAGACTCCAG AGAGTGAGTT TTCTGCAATG
AAAACATTTT ATAAGGTAAA AGAAAATTAT CCTGTATTGG AACGTGGAAC AGTAAACTAT
AGGATTTACA ATGTAGTTTA TGGAGTTTCA GCCGCTAAGA AAAATGATGT TGTTTATGGT
AATCAAGTTA TCAAGCATTT TGGATACAAT AACAATTCTT CGTTAAGTGA CTCTTATAAC
AAATCATATC TACTGGTTAG TTATGTTGGT AGAAACCAAG ATCAAAAACT ATTGCCAAAT
TTTGAAAACA GATGGAATTT TAATTATAGT GATTTTGTGC ACTTAGATAA TGACGTTGGA
GTTACTAAAT TTTACTCCGA TAAATTTTCA GATATTTATA TTATCAAACC TTAA
 
Protein sequence
MFSKDKCINT SRYIKLVSIF GFIIILSALT IITNSHSPNV YAFSIYNMYP WYFWALIVMA 
IFIGQMILIY NAISKYETNT WLIGFLMIIV SNLILLLMPI IRGYFIHGRE DALTHIGYMV
DIENTHSIGF NSYPMLHILG FTLKSFSGLS YNDITMFLPL LYSLFYIFSW YILGKYIFKN
KRDLFIMLSF SSILLLGSKN VMLSPNGQAI LFVPFFLYVF FKSRLPKKAV PYSILLILLS
FFIIFSHPLV TILLTVTILL SDFTMYLNRN KNSEFKIKKS TNLLFIMICS FLIWSSYLHI
LAYSLENIIS TLIFSDGGGS EFGRYQTSLS SVDVSFLKIF GLILNLYGPY IILSILSAAC
IIYMLTFWKK DNIEVNYYHK LSILGWAFLV IFSLLLFLFN DQFGFIRVYS YSIFFSIILI
SFSISMFLRR SSDKNNSNLK VLVIFSILIL ITSLSTYSLF LSPNILKIDQ QTPESEFSAM
KTFYKVKENY PVLERGTVNY RIYNVVYGVS AAKKNDVVYG NQVIKHFGYN NNSSLSDSYN
KSYLLVSYVG RNQDQKLLPN FENRWNFNYS DFVHLDNDVG VTKFYSDKFS DIYIIKP