Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0027 |
Symbol | |
ID | 3627286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 32530 |
End bp | 34323 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637698918 |
Product | hypothetical protein |
Protein accession | YP_303598 |
Protein GI | 73667583 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000139812 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00503722 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGTTCTCCA AGGATAAGTG TATTAATACT TCTAGATACA TAAAATTAGT ATCAATATTT GGGTTTATAA TAATATTATC AGCTTTAACT ATTATAACTA ACAGCCATTC TCCTAATGTA TATGCTTTTT CAATATACAA TATGTATCCA TGGTATTTTT GGGCTCTTAT TGTTATGGCT ATTTTCATCG GCCAGATGAT ATTAATCTAT AACGCAATTT CTAAGTATGA GACTAATACT TGGCTAATTG GTTTTTTAAT GATAATAGTT TCAAACCTAA TTTTATTGCT TATGCCAATT ATCCGAGGAT ATTTCATACA TGGCAGGGAA GATGCTTTAA CTCATATTGG TTATATGGTC GATATTGAGA ATACCCATAG TATTGGTTTT AACTCTTATC CCATGCTTCA CATACTGGGT TTTACACTAA AATCCTTCTC TGGTTTAAGT TATAACGATA TTACTATGTT TCTACCTTTA TTATATTCAC TATTCTATAT ATTTTCGTGG TATATTCTTG GAAAGTATAT ATTTAAAAAC AAACGTGATC TATTTATAAT GTTATCATTT TCTTCAATAC TATTACTTGG CAGTAAAAAT GTTATGCTTA GCCCTAATGG GCAAGCAATT CTTTTTGTCC CTTTCTTTCT TTATGTTTTT TTTAAATCGA GATTACCAAA GAAAGCTGTG CCATATTCGA TTCTGTTAAT TCTACTTAGT TTTTTTATAA TATTTTCTCA TCCTTTAGTC ACAATTTTGC TTACAGTAAC GATTTTATTA TCTGATTTTA CTATGTATCT TAATCGTAAC AAAAACTCTG AGTTTAAAAT AAAAAAGTCA ACTAATTTAT TATTTATTAT GATATGTTCC TTTCTCATAT GGTCTTCATA TTTACATATT CTTGCATACA GTCTGGAAAA TATAATATCT ACGTTAATAT TCAGTGACGG AGGAGGCTCT GAATTTGGGA GATACCAGAC ATCTCTTAGT TCTGTTGATG TATCTTTTTT GAAAATCTTC GGACTAATAC TAAATCTGTA CGGTCCCTAT ATCATATTAT CCATACTCTC TGCCGCCTGT ATAATATACA TGCTTACTTT TTGGAAAAAA GATAACATAG AAGTAAATTA TTACCATAAA CTTTCAATTC TAGGATGGGC ATTCCTTGTG ATCTTCTCAC TGCTACTATT TCTCTTCAAT GATCAATTTG GTTTTATAAG AGTTTATAGT TATTCAATAT TTTTCTCTAT TATCTTGATA TCTTTTTCAA TAAGTATGTT TCTAAGAAGA TCTTCGGATA AAAATAATAG TAATTTGAAA GTATTAGTAA TATTTTCAAT TTTGATACTT ATTACGAGTT TATCCACATA TAGTTTATTT TTGTCACCTA ATATTTTAAA AATAGATCAA CAGACTCCAG AGAGTGAGTT TTCTGCAATG AAAACATTTT ATAAGGTAAA AGAAAATTAT CCTGTATTGG AACGTGGAAC AGTAAACTAT AGGATTTACA ATGTAGTTTA TGGAGTTTCA GCCGCTAAGA AAAATGATGT TGTTTATGGT AATCAAGTTA TCAAGCATTT TGGATACAAT AACAATTCTT CGTTAAGTGA CTCTTATAAC AAATCATATC TACTGGTTAG TTATGTTGGT AGAAACCAAG ATCAAAAACT ATTGCCAAAT TTTGAAAACA GATGGAATTT TAATTATAGT GATTTTGTGC ACTTAGATAA TGACGTTGGA GTTACTAAAT TTTACTCCGA TAAATTTTCA GATATTTATA TTATCAAACC TTAA
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Protein sequence | MFSKDKCINT SRYIKLVSIF GFIIILSALT IITNSHSPNV YAFSIYNMYP WYFWALIVMA IFIGQMILIY NAISKYETNT WLIGFLMIIV SNLILLLMPI IRGYFIHGRE DALTHIGYMV DIENTHSIGF NSYPMLHILG FTLKSFSGLS YNDITMFLPL LYSLFYIFSW YILGKYIFKN KRDLFIMLSF SSILLLGSKN VMLSPNGQAI LFVPFFLYVF FKSRLPKKAV PYSILLILLS FFIIFSHPLV TILLTVTILL SDFTMYLNRN KNSEFKIKKS TNLLFIMICS FLIWSSYLHI LAYSLENIIS TLIFSDGGGS EFGRYQTSLS SVDVSFLKIF GLILNLYGPY IILSILSAAC IIYMLTFWKK DNIEVNYYHK LSILGWAFLV IFSLLLFLFN DQFGFIRVYS YSIFFSIILI SFSISMFLRR SSDKNNSNLK VLVIFSILIL ITSLSTYSLF LSPNILKIDQ QTPESEFSAM KTFYKVKENY PVLERGTVNY RIYNVVYGVS AAKKNDVVYG NQVIKHFGYN NNSSLSDSYN KSYLLVSYVG RNQDQKLLPN FENRWNFNYS DFVHLDNDVG VTKFYSDKFS DIYIIKP
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