Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0026 |
Symbol | |
ID | 3627285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 31258 |
End bp | 32436 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637698917 |
Product | hypothetical protein |
Protein accession | YP_303597 |
Protein GI | 73667582 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000112198 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00859577 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAGTGT TATACTTAAT CTCGACAATG GAGCCTCACT CAGGAAGAGG AGGGCATTAT TATAGTTTAA GAACTACTGC TGAAGAAATT AGTAAAAAGT TAGATTGTGC TATAGTTGTT ATTGGAAAAA GAGAGTCTCC AGTTATAAAT CAGTCAAAAG TAAAAGTATA TAATTTAATC TATGAAAAAA TAAGTGTTAT TAAAGTAATG AAAGATCTGA AAAACATTAT TGATATTGAG TGCCCTCAAG TTATTCATAG TTTTGATGAA GATACCTTCT TTTTTGGGAG TTTAATTAGT AATATTTTCA AAAAGCCATA TATTCATACG AAATGTGGAG GCCCAAATCC AAGAATAGCT TTTCCAAAAG TGAATAACTT AATATTATTT TCTCAAGAAA ACGTTAAGTT TTATCAGTCT TCAAGAAGAT TTAAAAAAAC CAATCTATTT TATATTCCAA ATCGAATCAA GGAAATTCCT TCAGATTTTT CAAGAATAAA AGACATCAAG TTATCAGTGC ATTGCAATAA ATCAAAAGTA TTTCTAATAA TTTCCAGGCT TGAAGTATCC AAAAAGAATG ATATATTACA GGCAATAGAT CTTGTAAAAA AATTAAATTT TGATGGAATT AAAACTAAGT TAATTATTAT TGGAACCCTA CAAGATGCAA ATGTTGGTAA AGAAATAAGT GAGAATCTAG ATAATAATAT TTATCTGTTC ACAGACGAGA AGTACTCAAT TAACGCTAGT CAGCTAATTG ATGTTGCTGA CTTTGTTATT GGTGGTGGAA GAAGCTTTAT GGAAGCTGCA TCAAAAGGGA AGATTATGCT GTGCCCCTTA AAAAACTCAA ATTATCCTTT ATTAATCACA GAAAAAAACT TTCAAAGTGC TTTTGATCAA AACTTTTCAA GTAGATTAAC TATTGATAAT TTCGATCCAG ATGATAATTA TAAACAAATT CTTCAAGCGA TAATCAACGA AGAATACGCA AATAATATTA CTAGTTTTAT TAAATCGGTT TCAAGTGAAC ATTTTGAAAT CAGCAGTCAG CTCAACAGAT ATTACAAGAT TTATAACGAA GCAAAATATA AAATGCATTT TAGTATGTTC GATATATTAA CTCAATTTTT CAGAATGGTT TATTGTAATG ACTTAATCCC AAAACTTAAA ACTATTTGA
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Protein sequence | MKVLYLISTM EPHSGRGGHY YSLRTTAEEI SKKLDCAIVV IGKRESPVIN QSKVKVYNLI YEKISVIKVM KDLKNIIDIE CPQVIHSFDE DTFFFGSLIS NIFKKPYIHT KCGGPNPRIA FPKVNNLILF SQENVKFYQS SRRFKKTNLF YIPNRIKEIP SDFSRIKDIK LSVHCNKSKV FLIISRLEVS KKNDILQAID LVKKLNFDGI KTKLIIIGTL QDANVGKEIS ENLDNNIYLF TDEKYSINAS QLIDVADFVI GGGRSFMEAA SKGKIMLCPL KNSNYPLLIT EKNFQSAFDQ NFSSRLTIDN FDPDDNYKQI LQAIINEEYA NNITSFIKSV SSEHFEISSQ LNRYYKIYNE AKYKMHFSMF DILTQFFRMV YCNDLIPKLK TI
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