Gene Mbar_A0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0019 
Symbol 
ID3627605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp22195 
End bp23232 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content27% 
IMG OID637698911 
Producthypothetical protein 
Protein accessionYP_303591 
Protein GI73667576 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.025798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0389064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTC GGTTTTATTC AGAAATAAAA GACAAAATTA CTTTAATTGA TGGTATTAGT 
ATTATTTTTA TTGTGCTCTT TCATGAGTTA GGCGGGATAA ATCGGCCCGA TTCTATATTT
TTGTTAAGAT ATCTTGCCAC ATTTGGCCTA GTTTTGTTTA CATTCTCATC TGGACTTAAG
ATGGGGATAA ATCATTCTGC AGAAATTAAC GACAAATCAT TTATAAGTAG GTACTTTGTT
AAGAGACTCA CTCGACTGTA TAAAGCATAT ATTGGGTATA CACTGCTGGC GTTTGTTCCT
CTATATTTCA TCAGTTATAT ATCAATTAAT TATCTTAACC TAAACTTTGA AGGTATTACA
CATTTTTGGA ATAATTTAAA CATAGACGGT TTACTTAAAA CTCTGGTTGG AAATAATATT
GTTTCTTTTC AATTAGGGTA TCTAATTTTA CTAATTGTAA TAACAACTAT TTGTTTTACA
ATTATATATT ATTTTCAGAT TGATACTTTA TTTTATTTAG GGATACCACT ACTGATATTT
GATGTTATTT ATAAGGATAC TTTAAAACAG TGCCCTAGTA TTTTGTTTAA TGTCATGATG
TATATGCCAG TTTATATTTT TGGGATAGCC TATGGCTACA AGCGATTAGA ACAAAATAAA
TTGTCCGTTT CATATATTTG TTCAGCAATT TTTGCTGCAA TATTTATTAT TTCCATAGTT
TACCCACAAT CATTTGCATA TAAATATGCT ATTTTATTAT ATGGAATAAC ATTCCCACCA
TTTATGATGT TATTTTCTAG ATTACTACTA AATTGCAAAT ATTTAAAAGA ATCACTAATG
CTGTGTGGGA AATATTCATT CCAAATTTAT TTATTTCATT GGCCGATTAT TTTACCTGTG
TTAAGCAGAT TTATTATTAA TATTCTCAAA ATTAATTATT TTTTCATTCC ATACGGTGTG
GCAGTCCTTA CAATAATTGT CTGTGTTTAT GTGTACAAAG TAAGTAAAAA ATTAAAATTA
AATCAAATAT TTGAGTGA
 
Protein sequence
MISRFYSEIK DKITLIDGIS IIFIVLFHEL GGINRPDSIF LLRYLATFGL VLFTFSSGLK 
MGINHSAEIN DKSFISRYFV KRLTRLYKAY IGYTLLAFVP LYFISYISIN YLNLNFEGIT
HFWNNLNIDG LLKTLVGNNI VSFQLGYLIL LIVITTICFT IIYYFQIDTL FYLGIPLLIF
DVIYKDTLKQ CPSILFNVMM YMPVYIFGIA YGYKRLEQNK LSVSYICSAI FAAIFIISIV
YPQSFAYKYA ILLYGITFPP FMMLFSRLLL NCKYLKESLM LCGKYSFQIY LFHWPIILPV
LSRFIINILK INYFFIPYGV AVLTIIVCVY VYKVSKKLKL NQIFE