| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0012 |
|---|
| Symbol | |
|---|
| ID | 3627598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 14637 |
|---|
| End bp | 15467 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637698905 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303585 |
|---|
| Protein GI | 73667570 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.185355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.165808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGG AAGACCTGGA CTTTTTCAAA AAATGGTTTC TGGATTATGT AGACCAATTT
TCCTCTCCTG AAGTCTTTAT CCAGGAAAAC GTTGAGCTAA AAATCAAACA TACGACGAGA
GTATGTGAAA ATATTCTTTT ACTTGCCAAA GCAGAAAATT TAGAGGAGAG AGATTGCAGG
CTCGCTGAAA CAATAGCCTT ATTTCATGAC CTGGGCCGCT TTGAACAGTT TACTAAATAC
AGGACGTTCA AAGACTCAGA ATCTGAAGAT CATGCTTTAC TTGGCGTAAA AATCCTGGAA
AATACCGGGA TTCTTTCTAT TCTATCTCGG AAAGAAAAAG ATATAATCCT GAAAGCTGTG
GAATATCATA ATCGCATGGA GATTCCCAAA TGCACAGAAA CTACCAGCGA ATTCCTTTTT
TATTTGAAAT TGATCAGGGA CGCCGATAAG CTTGATATCC TGAAGCTTGT GAGTGAAGAT
TATGAGAAAG AAGAAGAGTT CAGGAATCCA GCCCTTGAAC TCAATATTCC CGATACGCCT
GGATGTTCGG AAAATATAGT TGCGGATGTT CTGAATAATA GGATGGCAAA GCTTGCAGAT
GTAAAAAACC GGAATGACAT TAAACTCCTT CGCCTGAGCT GGATTTTTGA CATTAGTTTT
CCTGCAGCTT TTTCCCTTCT CAGAGAACAC GGCTATCTTG AGGCAATTCT GTACTCAATG
CCAGAGACTG AAAAAGTGCA GCTGGTACGC GAACATATTG AGAGCTATTT GAACTCGGTT
GAGACCAGAG CCAGAAGTAA AGCTGTGAAA AATGATATAG AAAAGCTGTG A
|
|---|
| Protein sequence | MQKEDLDFFK KWFLDYVDQF SSPEVFIQEN VELKIKHTTR VCENILLLAK AENLEERDCR
LAETIALFHD LGRFEQFTKY RTFKDSESED HALLGVKILE NTGILSILSR KEKDIILKAV
EYHNRMEIPK CTETTSEFLF YLKLIRDADK LDILKLVSED YEKEEEFRNP ALELNIPDTP
GCSENIVADV LNNRMAKLAD VKNRNDIKLL RLSWIFDISF PAAFSLLREH GYLEAILYSM
PETEKVQLVR EHIESYLNSV ETRARSKAVK NDIEKL
|
|---|
| |