Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0006 |
Symbol | |
ID | 3627592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 6080 |
End bp | 6667 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637698899 |
Product | hypothetical protein |
Protein accession | YP_303579 |
Protein GI | 73667564 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.799449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.210788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAAA TATTTGGAGT AAGCGCAATA TTTGCAACAT TTTTGATAGT AACTGTTGTA GTTGTACTGG CAGTAAGTAC AACTACAGAG GACGACAAAT CAGATATAAT AAATAACATT GCCTTCGACA AAAAATTGCT TGACTTCAAT GATACACTAG ATAATTTTGA AACTGTTACT ACAAATCCTA CAGCTTTTCT CGATGATGCA GCTGATGGTC AGGTTACACT TAGACTGTTA GGACAAAATT TTGATCTTAA ACTTCAGAAA ATACATATAG TAAGTGACAA CGCAACAATT ACAGCAGCAG ATGGATCTAT CTCAGATGCT CCTAAATCCT ATTCGTATAC TGGAACAGTT GTTGGGGAAG CAAATAGTAG CGTCGTATTA ACAGCAGGGG ATGGCGTTCT TATCGGAGAA ATAAACGTTG ATAATAAAAG TTATTATATT GACCAGACTG CTAAGAAATA TAACAACAAA GTTGTCCATA TAGTCTATTC TTCAGATGAG ATTAAGACGG GAAATATTTT GGCATATTGT ACTGTTTTTC CCGTAATTTA TTTTGTTCCT CAAGTGAGGA AGTCCTAG
|
Protein sequence | MNKIFGVSAI FATFLIVTVV VVLAVSTTTE DDKSDIINNI AFDKKLLDFN DTLDNFETVT TNPTAFLDDA ADGQVTLRLL GQNFDLKLQK IHIVSDNATI TAADGSISDA PKSYSYTGTV VGEANSSVVL TAGDGVLIGE INVDNKSYYI DQTAKKYNNK VVHIVYSSDE IKTGNILAYC TVFPVIYFVP QVRKS
|
| |