Gene Mbar_A0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0006 
Symbol 
ID3627592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp6080 
End bp6667 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content35% 
IMG OID637698899 
Producthypothetical protein 
Protein accessionYP_303579 
Protein GI73667564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.799449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.210788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TATTTGGAGT AAGCGCAATA TTTGCAACAT TTTTGATAGT AACTGTTGTA 
GTTGTACTGG CAGTAAGTAC AACTACAGAG GACGACAAAT CAGATATAAT AAATAACATT
GCCTTCGACA AAAAATTGCT TGACTTCAAT GATACACTAG ATAATTTTGA AACTGTTACT
ACAAATCCTA CAGCTTTTCT CGATGATGCA GCTGATGGTC AGGTTACACT TAGACTGTTA
GGACAAAATT TTGATCTTAA ACTTCAGAAA ATACATATAG TAAGTGACAA CGCAACAATT
ACAGCAGCAG ATGGATCTAT CTCAGATGCT CCTAAATCCT ATTCGTATAC TGGAACAGTT
GTTGGGGAAG CAAATAGTAG CGTCGTATTA ACAGCAGGGG ATGGCGTTCT TATCGGAGAA
ATAAACGTTG ATAATAAAAG TTATTATATT GACCAGACTG CTAAGAAATA TAACAACAAA
GTTGTCCATA TAGTCTATTC TTCAGATGAG ATTAAGACGG GAAATATTTT GGCATATTGT
ACTGTTTTTC CCGTAATTTA TTTTGTTCCT CAAGTGAGGA AGTCCTAG
 
Protein sequence
MNKIFGVSAI FATFLIVTVV VVLAVSTTTE DDKSDIINNI AFDKKLLDFN DTLDNFETVT 
TNPTAFLDDA ADGQVTLRLL GQNFDLKLQK IHIVSDNATI TAADGSISDA PKSYSYTGTV
VGEANSSVVL TAGDGVLIGE INVDNKSYYI DQTAKKYNNK VVHIVYSSDE IKTGNILAYC
TVFPVIYFVP QVRKS