Gene Ecaj_0935 details

Gene Information

• Locus tag: Ecaj_0935
• ID: 3617867
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia canis str. Jake
• Kingdom: Bacteria
• Replicon accession: NC_007354
• Strand: +
• Start bp: 1300921
• End bp: 1301400
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637698884
• Product: translation initiation factor IF-3
• Protein accession: YP_303564
• Protein GI: 73667548
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00138169
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACAG AAAAAAAAGT AAAACTTGTT GATCAAAATA GTGTTATGAT TGGAGTTGTA 
GATATTGAAG ACGCTTTATC TAGAGCTAAA GCTGTTAATT TAGATCTAGT TGAAATAGTA 
CATGATGATG AATATCCTCT ATGTAAAATA TTCGACTACA GTAAATACAG GTATAGCCAT 
AAAAAGAAAA TAAGTGATTC AAAAAAGAAA CAAAAAACCA TCATAGTAAA AGAACTTAAG 
TTCAAACTTA ATATTGGAGA TAATGACTAT AATGTAAAAC TAAACATGTT ACGTAGTTTT 
ATAGAAAGAG GCGATAAAGT AAAAATATCA CTCAGATTTA TAGGAAGAGA AATACTCCAC 
CCAGAAGTTG GAATGGAGAT TATAGAAAGA CTCATAAAGG ACACTTCTGA CATTGCAAAG 
CCAGAAAATT TACTAAAAAA GGAAGGAAAT CTGATTAATA TGGTGTTAAC TGCCAAATAA 

 

Protein sequence

MITEKKVKLV DQNSVMIGVV DIEDALSRAK AVNLDLVEIV HDDEYPLCKI FDYSKYRYSH 
KKKISDSKKK QKTIIVKELK FKLNIGDNDY NVKLNMLRSF IERGDKVKIS LRFIGREILH 
PEVGMEIIER LIKDTSDIAK PENLLKKEGN LINMVLTAK